| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_1197 |
|---|
| Symbol | |
|---|
| ID | 7112326 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011729 |
|---|
| Strand | + |
|---|
| Start bp | 1308873 |
|---|
| End bp | 1309730 |
|---|
| Gene Length | 858 bp |
|---|
| Protein Length | 285 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 643479463 |
|---|
| Product | zinc finger SWIM domain protein |
|---|
| Protein accession | YP_002376515 |
|---|
| Protein GI | 218438186 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4279] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 46 |
|---|
| Fosmid unclonability p-value | 0.13835 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCATG AACAAATCAG CAATAATCAA AGAGAATGGT GGGTACAGCG CTGGTTAGAA
TTATTAGATT CTTACCGGTT TAAAAAGCGC TTAGAAAGAG GGCGTAACTA TGCCAGAGAA
GGAAACGTCT TAAGTATTGA CTTTGAAGGG GCACAGGTAT TAGCAAAAGT CCAAGGAAGT
GAACCCGATC CTTATCAAGT TTCTCTGTCT ATCGCTCCCT TTACAGATGA AGATTGGAAT
TATGTGATTG ATACCCTCTC CGAAAAAGCG ATTTTTTCAG CCCAATTATT AGCCGGACAA
ATGCCTGAAA CTATCGAGCA AGTTTTTATT AGTAATGGGT TAAATTTATT TCCCTTTACC
TTATCGGATG TTCATTCTCG GTGTAGTTGT CCGGATAAAG CAAACCCCTG TAAACATATT
GCTGCGGTAT ATTATCAATT AGGCGATCGC TTTAGTGAAG ATCCCTTTGT TATGTTTCAA
TTGCGGGGAC GGAGTAAAGA AAATATCTTA GACGCTTTGC GACAACGACG CAAAAAAGAC
CCCTTAAATC AACCCACGCA ACCAGTAGAA AAAGAAGAAA CAACAAGCAA AACGACCACG
AATAAAACGA AGAAAAAATC CTCAAAAGAA GCAGAAAAAA CCGCTATTAA TCTGGATGAA
TTTTGGAAAT ATGAAGAACC GTTAGACTCT TCTTTAACCG TCATTGTTCC GCCTAAAGAC
CAAAAAACCC TTTTAGATGT ATTAGGAAGA ATACCCCTAG CTTATGCAGA AGCAGAAGCA
GTTGAACAAT ATTTAGAACA AGTTTATCAA GTAGCGAGTC AACAAGCCAT GATTACCGCT
TTAGGACGTG ATGAATAA
|
|---|
| Protein sequence | MNHEQISNNQ REWWVQRWLE LLDSYRFKKR LERGRNYARE GNVLSIDFEG AQVLAKVQGS
EPDPYQVSLS IAPFTDEDWN YVIDTLSEKA IFSAQLLAGQ MPETIEQVFI SNGLNLFPFT
LSDVHSRCSC PDKANPCKHI AAVYYQLGDR FSEDPFVMFQ LRGRSKENIL DALRQRRKKD
PLNQPTQPVE KEETTSKTTT NKTKKKSSKE AEKTAINLDE FWKYEEPLDS SLTVIVPPKD
QKTLLDVLGR IPLAYAEAEA VEQYLEQVYQ VASQQAMITA LGRDE
|
|---|
| |