Gene PCC7424_0853 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_0853 
Symbol 
ID7111656 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011729 
Strand+ 
Start bp947065 
End bp947781 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content46% 
IMG OID643479121 
Productsignal transduction histidine kinase (STHK), LytS 
Protein accessionYP_002376177 
Protein GI218437848 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value0.72349 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTAACTT CTCAAGAATT ACGCGCTATT GGTACATTTC CTAACCGACT CGATGCAGAA 
GATGCTCTTA ATGACCTCAG AAGTTCAGGC TTTGATATGA ATAGAGTCTC TATCTTAGCT 
AAAGATACAG ACAAAAGTGA AGACATCGGT GGCGCTCGCG TAAGAGATCG TGATCACGAT 
CGCGGCGATA ACGAAGCTCA AGAAGGTGCG GGTATTGGTG CAGTCGCAGG GACTGTATTA 
GGCGGTATCG GAGGATTACT GGTAGGATTA GAAGCTCTTT TAATTCCTGG TGTTGGCCCG 
TTTTTCGCAG CCGGTACGAT TGCCACCACT TTAGCAGGTG CGGGTATCGG TGCAGCAGCC 
GGTAGTCTTG TCGGAGCTTT AACCGGTTTA GGAATTCCTG AAGAAGATGC TCACGCTTAC 
AGCGATCGTG TATCTAGTGG TCACTATTTA GTCATGGTAG AAGGTTCTGC TGACGACATC 
AATCGCGCTC AATCAATTTT AAGAAATCAC GATATTAAGG GATGGAATGT GTACGATACA 
TCTACGGGTC GTCGTTACGA TTATGATGTG AATCAGGTTA ATACCGTAGT TGAGCGAGAA 
CAAGTCCGCA CCCCCAGAAC TGCGCCGGTT GAAGTTCAAC GAGAAGATAT TCGGACTCGT 
AGAACTACCG ATGACGAGAT TGTAGAAGTA GTCGATCATC GCAACGAGGT TCTTTAA
 
Protein sequence
MVTSQELRAI GTFPNRLDAE DALNDLRSSG FDMNRVSILA KDTDKSEDIG GARVRDRDHD 
RGDNEAQEGA GIGAVAGTVL GGIGGLLVGL EALLIPGVGP FFAAGTIATT LAGAGIGAAA 
GSLVGALTGL GIPEEDAHAY SDRVSSGHYL VMVEGSADDI NRAQSILRNH DIKGWNVYDT 
STGRRYDYDV NQVNTVVERE QVRTPRTAPV EVQREDIRTR RTTDDEIVEV VDHRNEVL