| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_0416 |
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| Symbol | |
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| ID | 7109273 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cyanothece sp. PCC 7424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011729 |
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| Strand | - |
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| Start bp | 458589 |
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| End bp | 460034 |
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| Gene Length | 1446 bp |
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| Protein Length | 481 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 643478689 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_002375750 |
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| Protein GI | 218437421 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 0.80889 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAATA TAACTTATGA ATCTGTTGCT CAAGCCAATG AGGAAATCTA CGAAAAATTA
TTAGTTTCTA TTGAGGCAGG TGTAGGAATG TTACAGATTT TTATTGCTGT GTGTGATACT
GACCGCCAAC GAGAGGCTAT TATTACTCGA TACGAACGAG ATTTAGCTCC TTCTATTAAT
ACTTATAGAG TTTTTCTTGA CCCTGAAGAA CCGACGCTAC GTCTAGCAGT TTCGCAGCAA
ATTACAGATA CTAAGAGAGA AAATGCTGTG GCTATGGTTA TGGGAACGCA AACATTAGGA
TTGAGAAAAA ATGATGAGTC TTTAAATAAG TTTTTTGGGT ATTTGCAGTG GACACGGGAA
GGGTTGCGAG AGCTAAAAAT GCCGATTGTT TTATGGATTC CTTCTCGGAT TTTAGTTCAA
CTTGCTAAGA AAGCTCCTGA TTTTTATAGC TGGCGAAATG GTGTTTTTCA ATTTCAGCCT
GAACCGTATG AAGAAACAGT TGAACCCCTA ACTACTCAAA GTATAGAGTT TGAAGGAAAT
AAGTCTAGTT CGATTTTTGA TGTAGAACAA TTAGAGTCTT CTTTGGCCAA AGCACTGGCT
ATGTGGGGAG AAAATAGCAG CAATCTTGAA CCTCTTTATA GTCAACTGGG TAATCTCTAC
GCCGATCGGG TACAATCAGG AGAATCCCCA GATAGAGAAC GAGAATTTAT ATTAGCACAA
GATTATTTGA ATAAGGCGAT CGCGCTACAA ACTCAATTTA AACAAGAAGA TGCTCTTGCT
CATACTCTCA GCACTTTAGC TTTACTCTAC AGATCTCAAG GCAGGTACAC TGAAGCCGAA
CCCCTTTTTT TACAAGCATT AGAACTGAGT AAACACATCT TAGGAAACAA CCATCTCGAT
GTAGCAACTT CTCTCAACAA TTTAGCTTTA CTCTACGATT CTCAAGGCAG ATACAGCGAA
GCCGAACTAC TTCATAAAAA AACATTAAAA CTTAGAAAAC ATCTTTTGGG AGACAACCAT
TTCGATGTGG CAACTTCTCT CAACAATTTA GCTTTACTAT ACAAATCTCA AGGCAGGTAC
GAAGAAGCCG AACCCCTTTT AAGACAGGCA TTAGAACTGT ATAAACGCCT TTTAGGAGAA
AACCATCCCA ATGTGGCAAC TTGCCTCAAC AATTTAGCAG CACTCTACGA TTCTCAAGGC
AAGTACGAAG AAGCCGAACC TTTTTTAATA CAAGCATTAG AATTGAGAAA ACGCCTTTTA
GGAGACAATC ATCCCGATGT AGCAATTTCC CTCAACAATT TAGCTTCTCT CTACTCTTCC
CAAGGCAGGT ACGCAGAAGC CGAACCCTTC TTTTTACAAG CATTGTTAAT ATTAGAAAAA
TCGTTAGGTG AACATCATCC CCATACACAA ACGGCTCGTA AGAATTTGCA AAGAATGCGG
CGATAG
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| Protein sequence | MNNITYESVA QANEEIYEKL LVSIEAGVGM LQIFIAVCDT DRQREAIITR YERDLAPSIN
TYRVFLDPEE PTLRLAVSQQ ITDTKRENAV AMVMGTQTLG LRKNDESLNK FFGYLQWTRE
GLRELKMPIV LWIPSRILVQ LAKKAPDFYS WRNGVFQFQP EPYEETVEPL TTQSIEFEGN
KSSSIFDVEQ LESSLAKALA MWGENSSNLE PLYSQLGNLY ADRVQSGESP DREREFILAQ
DYLNKAIALQ TQFKQEDALA HTLSTLALLY RSQGRYTEAE PLFLQALELS KHILGNNHLD
VATSLNNLAL LYDSQGRYSE AELLHKKTLK LRKHLLGDNH FDVATSLNNL ALLYKSQGRY
EEAEPLLRQA LELYKRLLGE NHPNVATCLN NLAALYDSQG KYEEAEPFLI QALELRKRLL
GDNHPDVAIS LNNLASLYSS QGRYAEAEPF FLQALLILEK SLGEHHPHTQ TARKNLQRMR
R
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