| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_0317 |
|---|
| Symbol | |
|---|
| ID | 7108935 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011729 |
|---|
| Strand | + |
|---|
| Start bp | 342334 |
|---|
| End bp | 343074 |
|---|
| Gene Length | 741 bp |
|---|
| Protein Length | 246 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 643478592 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_002375653 |
|---|
| Protein GI | 218437324 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 46 |
|---|
| Fosmid unclonability p-value | 0.0902023 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTTCATG GTTCATTGTT CATTACTTGT AAATTATGTT CGTTTAATGA TATGAATAAA
CAAGCAAATA ATCAATTGAT TGCTATCACA GGAGTCACCA AAGGACTGGG ACGGGCAATG
GTTGACCAAT TTATAGAAAA AGGACATACT ATAATAGGCT GTGGACGTTC TCAACAAGAA
ATTAACCATC TGAAGACGAT TTACCCGTCT CATCATTTTT TTGTTGTGGA TGTATCCGAC
GGAAAAGACG TACAACAATG GGCTAATCAA GTCATTGAAA ATATAGGAAC ACCAGAGTAT
TTAATTAATA ATGCTGCTAT TATCAATCGT CCGGATGCCT TATGGAATAT TACAGAAGAA
GAATTTTCCC AATTAATTGA TATTAATATT AAAGGAGTTG CTAATACCAT TCGGGCTTTT
TTACCGGCAA TGATCGAGAA AAAATCGGGA ATGATCATTA ATTTTTCTTC TGGGTGGGGA
CGGTCTACCT CTCCTGAAGT TGTCCCTTAT TGTACCTCCA AATGGGCAAT AGAAGGATTA
TCTCAAGGAT TATCCCAAGA AGTGCCCAAA GGGATAGGAG TAATTGCCTT AAATCCAGGA
ATTATTAATA CTGAAATGTT GCAAACTTGT TGGGGAGAAG GGGCTAAACA TTATTCTACG
CCTGAACAAT GGGCTAAAAA AGCAGTTCCC TTTATCTTAA AACTGCACAG TAAAGACAAT
GGTAAATCTC TCACAGTTTA G
|
|---|
| Protein sequence | MVHGSLFITC KLCSFNDMNK QANNQLIAIT GVTKGLGRAM VDQFIEKGHT IIGCGRSQQE
INHLKTIYPS HHFFVVDVSD GKDVQQWANQ VIENIGTPEY LINNAAIINR PDALWNITEE
EFSQLIDINI KGVANTIRAF LPAMIEKKSG MIINFSSGWG RSTSPEVVPY CTSKWAIEGL
SQGLSQEVPK GIGVIALNPG IINTEMLQTC WGEGAKHYST PEQWAKKAVP FILKLHSKDN
GKSLTV
|
|---|
| |