Gene PCC7424_0189 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_0189 
Symbol 
ID7110275 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011729 
Strand+ 
Start bp205455 
End bp206138 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content43% 
IMG OID643478466 
Producthypothetical protein 
Protein accessionYP_002375527 
Protein GI218437198 
COG category[R] General function prediction only 
COG ID[COG5401] Spore germination protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value0.48473 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAATA AAAATCCAGG TAATAAAAAA AGTAAGTTTT CTATTGGTTC TCTTGCAGGG 
GTAGCATTAG CCTTAGTCGT GACAGGAGGA ATTTTTGCCT GGGTGACGAT TAATCGATTA 
ACCTCCACCT CTAACCCAAC CACACCCATT CCGACAAAAA CTGTTGAACC CGTTAATCCG 
CCGGTTGTGG AACAACCCCA ACAACCAACG CCACAACCCC AACCGAGTCC ACAAAAAACC 
ACAACACCTC AACAACAGAC AACAGCAGTT TATTGGCTTA AAGTCAGTCC AACAGCGACT 
CAATTAGAAG AAGTCCCCAT CACCGCCCAA AAATCCACCG ATAAAACAGA AGCTTTAACA 
GTCGCCTTTC AAGATTTATT AGCCGGGCCA CAAGACCCTA GTTATGTGAC GACTATTCCT 
GAAGGCACAA AGTTATTAGA TTTGAAAGTA GATAACAAAG GGGTTCATGT TAACTTATCT 
CAAGATTTTA CCATAGAAGG GGGGTCAGCA GAAATGATCG GGCGTTTAGC TCAAGTCATT 
TACACGGCGA CTAGCTATGA TCCTAAAGTT CCTGTGTGGC TTTCAGTGGA AGGAGAACCT 
TTAGAATTGT TAGGGGAAGG TCATGGATTA ATGGTCGACC AACCGATGAC TCGTGACTTG 
TTTGTCCAAA ATTTCCAACT CTAA
 
Protein sequence
MKNKNPGNKK SKFSIGSLAG VALALVVTGG IFAWVTINRL TSTSNPTTPI PTKTVEPVNP 
PVVEQPQQPT PQPQPSPQKT TTPQQQTTAV YWLKVSPTAT QLEEVPITAQ KSTDKTEALT 
VAFQDLLAGP QDPSYVTTIP EGTKLLDLKV DNKGVHVNLS QDFTIEGGSA EMIGRLAQVI 
YTATSYDPKV PVWLSVEGEP LELLGEGHGL MVDQPMTRDL FVQNFQL