| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BbuZS7_0857 |
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| Symbol | topA |
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| ID | 7106745 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Borrelia burgdorferi ZS7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011728 |
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| Strand | - |
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| Start bp | 868599 |
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| End bp | 871145 |
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| Gene Length | 2547 bp |
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| Protein Length | 848 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 643478263 |
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| Product | DNA topoisomerase I |
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| Protein accession | YP_002375325 |
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| Protein GI | 218249920 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA |
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| TIGRFAM ID | [TIGR01051] DNA topoisomerase I, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAAATA AAAAGTTGAT AATAGTTGAA TCGCCAACAA AAGCCAAAAC AATAAAGAAG
TTTCTCGATG AATCATTTCT AGTAGAAGCA TGCATTGGAC ATGTAGTAGA TCTACCAAAC
AACGCAAAAG AAATCCCAAA AGAATATAAA AAATACGAAT GGGCAAATAT TTCTATAGAT
TATAACAATG GATTTAATCC AATTTACATT ATTCCCAGCA ATAAAAAACC AATTGTATCA
AAACTAAAAA AATTAGTAAA AACAATAAAT GAAATATATC TTGCAACCGA CCAAGACAGA
GAAGGAGAAA CTATAGCATT TCACTTAAAA GAAGTATTAA AAATCAAAAA CTACAAACGG
ATGATATTTC ATGAAATCAC AGAAACCGCA ATAACTGAAT CACTAAAAAA TACTAGAAAT
ATAGACATGA ACCTTGTTAA TGCCGGGGAA GCTAGAAGAA TATTGGACCG ACTATACGGG
TATACAATCT CTCCACTACT TTGGAAAAAA GTAGCTTATG GACTTTCTGC TGGGCGAGTA
CAATCTGTTG GATTAAAATT ATTAATAGAG AAAGAAAAAA CTAGAATAAA TTTCAAAAAG
GCAAATTATT ATTCAATTTT ACTTCAATGT AAACACGAGA AAAAAAACTT GTTGCTTGAA
GCAAAATTAG AAGAAATTGA CGGCAAAAAT ATAGCAGAGG GTAAAGACTT TGTAAATGAA
ACTGGAAAAC TTAAAAATAT TGCCAAAACA ACAATAATAA CCCAAGATTT AATGATAGAG
CTTGAAAAAG AATTAAAAAA TGGACAAAAA ATTGAATTAA TTTCAATAGA AACTAAAAAA
ATAAAAATAC CTCCTCCAAA GCCATTTACC ACCTCTACAC TTCAACAAGA AATAAATAAG
CGTCTTAAAA TTGGAACAAA GCAAATCATG CAACACGCTC AAAAACTTTA CGAACACGGA
TACATTACCT ATATGAGAAC AGACTCTCAT AATATTGCTA AAATTGCAAA AGATAAAATA
ACAAAAATAA TAAAAAATAA ATATGGGAAA GAGTATATAG AGGAAAAAGA TAGAATTTAT
GAAAAAGAAA AAATGGCTCA AAATGCACAT GAGGCAATAA GGCCTTCTGA AATATTTATT
CCAAATGAAA CCATAGAAAT AGAAAGCAAA ACCGCTAAAG AAATTTACAA AATAATATGG
GATAGAACCA TTATTTCTGG AATGAAAGAT GCAATAAAAG AAAATATAAA ACTGACTTTT
AAATATAAAA ACTTAATTTT CAGATCAAGT TTTACAAAAA TAATTTTTGA TGGATTTCTT
AAACACACTA AAGAACAAGA TGAACATCTT AACATAAATT TTGACTTAAT TAAAAAAGGA
GATACATTTT CCATAGTTAA AATGAAAACA AGTGAGCACG AAACAAAGGC TCCATTTAGA
TACACAGAAG CGTCTCTTGT GCAAAAAATG GAAAAAGAAG GAATAGGTCG TCCCTCGACC
TATTCTACAA TTATATCAAC ACTTTTAGAA AGAGAATATG CATTCAAACT TAACAACACA
TTAATGCCAA CTATAAAAGG TGCTGCTGTA ATAAATCTTC TTGAGAAATA TTTTCCAGTA
CTCATTGAAC TAAATTTCAC CTCTAATATG GAAGAAAAAT TAGACAAAAT AGCAATAGGA
AAACTAGATA AAATAAAATA TCTAAGTAAA TTTTATAATG GCAAAAAAGG ACTAAAAGAT
ACAGTAATGC AACTAGAGCC TAAAATTGAT TCCTCTGAAT TTAGAACCGT TATTGAAAGT
CAAAAAATAG AAAATAAAAA TAGCATTAAT TACACAATAA ACATTGGTAA ATATGGGCGT
TATTTGATAT TCAAAGGACA TAATTACTCA ATTAATGCAA AAACTCCATT AGAAAATTTG
TACAAAAAAG ATGAAATAGA AAAAATAATA AATGAAAAAG AGCTAAAACC CAATATACTT
GGGGTTGATC CTTTAACAGG ACTTAATGTG ATCTTTAAAA ATACAATTTA CGGAAACATT
GTTCAACTTG GAGAAGATAC CCATGCCCCT CAAGAATATA CAAAAAAAGG AAAACCTAAA
AAATTAAAAA TAATAAAAGC AAAAAAAGCA TCAACTAAAA AAATTGACCC TGAAAACATA
ACATTGGAGC TTGCTTTAAA ATTGCTCTCA CTGCCAAAAC CAATTGGCAA ACATCCCCAA
ACCAATGAAC AAATCATTGC TGCAACTGGT GTTTTTGGGG ATTATATTAA AACTGAAAGC
GGAAGCATTG CTTGCTCGCT AAAAAAAGAT TTAAAAGCAT ATGACATAAC ACTAGACAAG
GCCATCAGCC TACTCAACGA AAGAGCCAAT AAAGTGGGTA TAATCGTTAA AACAATCACA
TTTTCTAAAA ACAAAATTGG CAACAAAATA TATATTTACA AAAAAAACGA CAAATTTTAT
GCTAAAATTA AAAGAAAGAA GATTGATTTA CCTGATAACA TTAATCTTGA AGAAATAAAT
GAGAAATATG TATTCAGCTT GTTATAA
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| Protein sequence | MQNKKLIIVE SPTKAKTIKK FLDESFLVEA CIGHVVDLPN NAKEIPKEYK KYEWANISID
YNNGFNPIYI IPSNKKPIVS KLKKLVKTIN EIYLATDQDR EGETIAFHLK EVLKIKNYKR
MIFHEITETA ITESLKNTRN IDMNLVNAGE ARRILDRLYG YTISPLLWKK VAYGLSAGRV
QSVGLKLLIE KEKTRINFKK ANYYSILLQC KHEKKNLLLE AKLEEIDGKN IAEGKDFVNE
TGKLKNIAKT TIITQDLMIE LEKELKNGQK IELISIETKK IKIPPPKPFT TSTLQQEINK
RLKIGTKQIM QHAQKLYEHG YITYMRTDSH NIAKIAKDKI TKIIKNKYGK EYIEEKDRIY
EKEKMAQNAH EAIRPSEIFI PNETIEIESK TAKEIYKIIW DRTIISGMKD AIKENIKLTF
KYKNLIFRSS FTKIIFDGFL KHTKEQDEHL NINFDLIKKG DTFSIVKMKT SEHETKAPFR
YTEASLVQKM EKEGIGRPST YSTIISTLLE REYAFKLNNT LMPTIKGAAV INLLEKYFPV
LIELNFTSNM EEKLDKIAIG KLDKIKYLSK FYNGKKGLKD TVMQLEPKID SSEFRTVIES
QKIENKNSIN YTINIGKYGR YLIFKGHNYS INAKTPLENL YKKDEIEKII NEKELKPNIL
GVDPLTGLNV IFKNTIYGNI VQLGEDTHAP QEYTKKGKPK KLKIIKAKKA STKKIDPENI
TLELALKLLS LPKPIGKHPQ TNEQIIAATG VFGDYIKTES GSIACSLKKD LKAYDITLDK
AISLLNERAN KVGIIVKTIT FSKNKIGNKI YIYKKNDKFY AKIKRKKIDL PDNINLEEIN
EKYVFSLL
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