Gene PCC8801_3774 details

Gene Information

• Locus tag: PCC8801_3774
• ID: 7103994
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Cyanothece sp. PCC 8801
• Kingdom: Bacteria
• Replicon accession: NC_011726
• Strand: -
• Start bp: 3963517
• End bp: 3964194
• Gene Length: 678 bp
• Protein Length: 225 aa
• Translation table: 11
• GC content: 35%
• IMG OID: 643476779
• Product: hypothetical protein
• Protein accession: YP_002373880
• Protein GI: 218248509
• COG category: [K] Transcription; [T] Signal transduction mechanisms
• COG ID: [COG1842] Phage shock protein A (IM30), suppresses sigma54-dependent transcription

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAAGGG GTGATCAAAT TTATGTTTAT CGAGAGTTAT TAAACCTCAA CGGGGTTTAT 
GAACATCACG GCATCGATTG TGGAGATGGT TATGTTATTC ACTATCGAAA ACCGAGTGAG 
ACAATCGAAA AAACAACCCT ATTAACCTTT ACTAGAGGAA ACTCTATTTA TCTTCGGGAA 
TATCCCAACG AATTTTGTTT TATTCCTGAT GTCGTTGTCA GTCGAGCCCA CGTCAGATTA 
GGGGAACAAA AATACAATTT TTTGTTTAAT AATTGTGAAC ATTTTGCCAC TTGGTGTAAA 
ACAGGAATCA ATCATAGTAC TCAAATTAAA GAGTTTCTTC CTTTTCTTAA ACATCTCAAT 
GTTGCGGGAT TATATAACCC TTTAAAACAA GCCTTAAAAG AATCAGATCC CCAAAATGCC 
CAACGATTAT TACAGGAAGC TTTAGACGAT ATTAGAGTGG TTTGGGACGA TCTTCAACCC 
CAATATAAAC AAGCCATTAA AGAACGAGAT ACTTGGGATC AAGTTGCTAG AGAAGCAGTT 
AAACGAAACC GAGATGATTT AGCCCGCGCT GCCTTAGAAA AAAAGTTAAC TTATCAACAA 
AAAATTAATC GTTTCAAGGA ACAATTAGAT CAGTTAGCAA TTATGACAGA AAAAGTCTTA 
AAAAATCTTT TAATATGA 

 

Protein sequence

MARGDQIYVY RELLNLNGVY EHHGIDCGDG YVIHYRKPSE TIEKTTLLTF TRGNSIYLRE 
YPNEFCFIPD VVVSRAHVRL GEQKYNFLFN NCEHFATWCK TGINHSTQIK EFLPFLKHLN 
VAGLYNPLKQ ALKESDPQNA QRLLQEALDD IRVVWDDLQP QYKQAIKERD TWDQVAREAV 
KRNRDDLARA ALEKKLTYQQ KINRFKEQLD QLAIMTEKVL KNLLI