Gene PCC8801_1776 details

Gene Information

• Locus tag: PCC8801_1776
• Symbol: aksA
• ID: 7101841
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Cyanothece sp. PCC 8801
• Kingdom: Bacteria
• Replicon accession: NC_011726
• Strand: -
• Start bp: 1862353
• End bp: 1863486
• Gene Length: 1134 bp
• Protein Length: 377 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 643474844
• Product: trans-homoaconitate synthase
• Protein accession: YP_002371978
• Protein GI: 218246607
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0119] Isopropylmalate/homocitrate/citramalate synthases
• TIGRFAM ID: [TIGR02660] homocitrate synthase NifV

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGACTACG TTAACATTAA CGATACCACC CTGCGCGATG GAGAACAAGC GGCGGGCATT 
GTCTTTACCC CTGACGAAAA AATCTCCTTG GCTGTCTTGA TGGATGCCAT GGGTATTCCT 
GAATTGGAAG TCGGTATCCC TGCCATGGGA GGCAGCGAAG CCCAAGCCAT TACCACTATT 
GCCAAATTAG GCTTAAAAAC TGACCTTTTA GGTTGGAATC GAGCGAATCG CTCCGATATT 
GAGGCTTCTA TCGCCTGTGG ACTGAGAAGG GTTCATATTT CCATCCCCGT CTCTGAAGTC 
CAAATTCAAG CCAAGTTTCA AGGGAATTGT CGTGTTGTCT TAGAACGGCT ACAGGATACT 
CTGAATTTTG CCTTGGATCG CGGTTTATTT GTCTCTGTCG GGGCGGAAGA CTCCTCTAGG 
GCTGTCGAAT CATTTTTACT CGATGTGGCG GGTTCTGCCC AAGATTGGGG GGCTTCTCGT 
TTTCGCTTTT GCGATACGGT AGGTATTCTC GATCCGGCAA CCACCACCGA AAAAGTCGGT 
AAATTGGTTC AGTCTGTCTC TATTCCCATC GAAATGCACA CCCACAATGA TTTTGGCCTA 
GCCACGGCTA ATGCTTTAGC GGGGTTACAA GCGGGGGCAA CTTCCGTTAA TACCACCGTT 
AACGGCTTAG GAGAAAGGGC GGGCAATGCA GCCCTTGAGG AGATGGTCAT GGCTTTGAAG 
CAACTGTACA AAGTCAAATT GGACATTAAT ACCCGTCGGT TGCGGGAATT ATCACAATTG 
GTCGTCACAG CTTCGGGGTA TCAACTGCCC CCATGGAAGG CGATCGTTGG AGATAATGCC 
TTTGCCCATG AGTCGGGTAT TCATGCCCAT GGAGTCCTGA AAAACCCTCA AACCTATGAA 
CCCTTTGCCC CTGAAGAAAT TGGGATGGAA AGGCGTTTAG TGGTGGGCAA ACATTCTGGC 
CGGCATTTAG TCTCTAATGT ACTAGGACAA CATGGCATTA CTTTAGACCG TGAGGAAGCC 
CAATTTGTTC TAGAGGCGGT GCGAAATTTG TCGGTTCAGA TGAAACGCAG TTTAACGGTT 
GATGAATTAC TTGAGTTAGT ACCCAATAGG AGAGTGTCCC ATGGGATTAT ATAA 

 

Protein sequence

MDYVNINDTT LRDGEQAAGI VFTPDEKISL AVLMDAMGIP ELEVGIPAMG GSEAQAITTI 
AKLGLKTDLL GWNRANRSDI EASIACGLRR VHISIPVSEV QIQAKFQGNC RVVLERLQDT 
LNFALDRGLF VSVGAEDSSR AVESFLLDVA GSAQDWGASR FRFCDTVGIL DPATTTEKVG 
KLVQSVSIPI EMHTHNDFGL ATANALAGLQ AGATSVNTTV NGLGERAGNA ALEEMVMALK 
QLYKVKLDIN TRRLRELSQL VVTASGYQLP PWKAIVGDNA FAHESGIHAH GVLKNPQTYE 
PFAPEEIGME RRLVVGKHSG RHLVSNVLGQ HGITLDREEA QFVLEAVRNL SVQMKRSLTV 
DELLELVPNR RVSHGII