Gene PCC8801_1548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC8801_1548 
Symbolfmt 
ID7104183 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8801 
KingdomBacteria 
Replicon accessionNC_011726 
Strand+ 
Start bp1623208 
End bp1624206 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content38% 
IMG OID643474620 
Productmethionyl-tRNA formyltransferase 
Protein accessionYP_002371757 
Protein GI218246386 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0223] Methionyl-tRNA formyltransferase 
TIGRFAM ID[TIGR00460] methionyl-tRNA formyltransferase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGATTA TTTTTTTGGG AACTCCTCAA TTTGCTATTC CTACCTTACA AAAATTATTA 
GATCATCCTG ATTTTGACGT GATAGGTGTT GTTACTCAAC CCGACAAACG ACGGGGAAGA 
GGTAATCAAT TAATCCCCTC CCCTATCAAA AAAATTGCCC TAGAACACGG GTTAACTGTC 
TGGCAGCCGA AAAACCTCAA AAAAGCAAGA ACAACCCTCT CACAGCTTAA GGAAGCCCAA 
GCAGATGCTT TTGTTGTTGT TGCCTACGGT CAACTACTTT CTTCTGAGAT TTTAGCCATG 
CCTAAACTCG GTTGTATTAA CGTTCATGGT TCAATTTTAC CCCAATATCG GGGGGCTGCG 
CCGATTCAAT GGAGTATTTA TCACGGAGAC AAAGAAACAG GTATTACTAC TATGTTAATG 
GATGAGGGCA TGGACACAGG AGCCATGTTA ATCAAAGCTT ATACTCCTAT TCACTTATTA 
GATAATGCCC ATGAACTTGC AGAAAAGTTA GCTGAACAAG GGGCAGACTT ATTAATAGAA 
ACCTTACAAA AACTGAAATT AGGAGATATT ACAGCAACGG CTCAAGATAA TGACCAAGCA 
ACCTATGCTC CTTTAATTGA AAAATCGGAT TATGTTGTTG ATTGGACAAA ATCTGCGATC 
GCTATTCATA ATCAAATCCG TGCGTTTTAT CCTAATTGTG TGGCAACTTT TCGTAATCAA 
TCTCTAAAAA TCATGGCAAC TATTCCCCTA GGAGATACTT ATTGGGAACA GTTACCCGAA 
GAGTTTCAAA AGCTACAACA ACAAACAACA ATGTTAGCTA ATATTAAAGG AAAAACTGGA 
GAAGTGGTTA GTATTATTAA AAATTTTGGT GCAGTTATTC AAACAGGAGA GGGACTATTA 
TTATTAAAAG AAGTGCAGTT ATCAGGCAAA CGTCAACAGT CGGGTTGGGA TTTTGTTAAC 
GGGACTCGTT TAGAAGTAGG AGAAATAATA ACGTCATGA
 
Protein sequence
MKIIFLGTPQ FAIPTLQKLL DHPDFDVIGV VTQPDKRRGR GNQLIPSPIK KIALEHGLTV 
WQPKNLKKAR TTLSQLKEAQ ADAFVVVAYG QLLSSEILAM PKLGCINVHG SILPQYRGAA 
PIQWSIYHGD KETGITTMLM DEGMDTGAML IKAYTPIHLL DNAHELAEKL AEQGADLLIE 
TLQKLKLGDI TATAQDNDQA TYAPLIEKSD YVVDWTKSAI AIHNQIRAFY PNCVATFRNQ 
SLKIMATIPL GDTYWEQLPE EFQKLQQQTT MLANIKGKTG EVVSIIKNFG AVIQTGEGLL 
LLKEVQLSGK RQQSGWDFVN GTRLEVGEII TS