Gene PCC8801_1543 details

Gene Information

• Locus tag: PCC8801_1543
• ID: 7104179
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Cyanothece sp. PCC 8801
• Kingdom: Bacteria
• Replicon accession: NC_011726
• Strand: +
• Start bp: 1619072
• End bp: 1619785
• Gene Length: 714 bp
• Protein Length: 237 aa
• Translation table: 11
• GC content: 35%
• IMG OID: 643474615
• Product: glycoside hydrolase family 24
• Protein accession: YP_002371752
• Protein GI: 218246381
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG4678] Muramidase (phage lambda lysozyme)

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATTGTCC ATCATTCTCG ACGTAAACGT ATTGGTAAAA GATTTAGGCT CAGAAAACCT 
TGTCATTGGA TTTCTAATTT AATCCTCATT GTTGCTTTAG TTTGGTTCGC TCACAATCTT 
CAGAAAAATA GTCAACCATC CCCCTATTCA TCTTTAATAA CTCACTTACC TGAACTAGCC 
ATGTCAGGAG GTGATCCCTA TATTCGTGCT TTGATGTTAA CTATTTCTGC GAGTGAATCT 
AATCATAAAA ATTCTTATTT TCTCTTATAC GGTGGTAGTC ATGTGCATAA TCTCAAACAA 
CATCCTAACC AATGCTTACC GATTAAAATT GGACCGAATA AAGGTAAGTG TTCAACGGCC 
GCAGGACGCT ATCAATTTTT AACTTCTACT TGGCAAGAAA AAGCTCAAAA ATATCATCCA 
AATCCTCATA AAACTCACGG CAAAATCATC TATAGTTTTG AACCTAAATA TCAAGATATG 
GTTGTTTATC GCTGGCTCAA AGATCATCAT CAATGGGATG TGGATTTATT AACTTTGCTT 
AAAGAAGACA GAGTTGAAGA AGTATTAACT GAATTATCCG ATGTTTGGAC AAGTTTAGGG 
GGTGGTATTG AAGATAATTT GATGACTCCT CATTTACCTA GCCTTTATCG TCATTTTTTA 
GCTCAACAAC TGAAATCTCA GAATAGCGAT CGAGTCTCTG AAAATCTTAT TTAA 

 

Protein sequence

MIVHHSRRKR IGKRFRLRKP CHWISNLILI VALVWFAHNL QKNSQPSPYS SLITHLPELA 
MSGGDPYIRA LMLTISASES NHKNSYFLLY GGSHVHNLKQ HPNQCLPIKI GPNKGKCSTA 
AGRYQFLTST WQEKAQKYHP NPHKTHGKII YSFEPKYQDM VVYRWLKDHH QWDVDLLTLL 
KEDRVEEVLT ELSDVWTSLG GGIEDNLMTP HLPSLYRHFL AQQLKSQNSD RVSENLI