Gene PCC8801_1327 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC8801_1327 
Symbol 
ID7102214 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8801 
KingdomBacteria 
Replicon accessionNC_011726 
Strand- 
Start bp1381402 
End bp1382031 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content44% 
IMG OID643474409 
Productcold-shock DNA-binding domain protein 
Protein accessionYP_002371546 
Protein GI218246175 
COG category[S] Function unknown 
COG ID[COG3326] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAACCCG GACTCCGCAG TGGAAGGCTT ACAAAATGGA AAGATGAGCG TGGATTTGGT 
TTTATCCAAC CTATTGATGG AAGCCAAGAA GTTTTTTTGC ATATTTCTGA AGTTAAAGAT 
GCAAGCCGTC GTCCACAGGA GAACGACACG ATTTATTACC ATTGCGTAGT TGACTCAGAT 
GGAAAAGTTC GTGCTTGCAA CGCATTTATT TTGGGGGCAA GAAACAAATC AGCAACTTTG 
AGTAATCGCG CCAACCCTTC TGACACGATT GTTTCGAGCT TTCCGATAGT TGAGGTAGTC 
CTATTGTCAC TTCTACCTTT GGTTGGGGCT ATTCATTTTG CATGGACAAC ACGCAACCCC 
CTTCCACTGG TTCTTTATCC TGTAATGAGT TTGGTGACCT ACGCCCTATA CGCTGATGAT 
AAATCTCGTG CTAAACGAAA GGATTGGCGA ACCTCTGAAC AAATACTACA TCTGTGTGAA 
CTTGCAGGTG GATGGTTGGG CGGGTTTATT GCCCAGCGAA TACTGCGCCA CAAAAGTCAG 
AAAGAGTCCT ATCAAGCTAC GTTTTGGGTG ATCGTGATCA TTCATTACAT TGCATGGCTG 
TTTTGGCTAT TTTTGGGAAG AACGCTATGA
 
Protein sequence
MQPGLRSGRL TKWKDERGFG FIQPIDGSQE VFLHISEVKD ASRRPQENDT IYYHCVVDSD 
GKVRACNAFI LGARNKSATL SNRANPSDTI VSSFPIVEVV LLSLLPLVGA IHFAWTTRNP 
LPLVLYPVMS LVTYALYADD KSRAKRKDWR TSEQILHLCE LAGGWLGGFI AQRILRHKSQ 
KESYQATFWV IVIIHYIAWL FWLFLGRTL