| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC8801_1285 |
|---|
| Symbol | |
|---|
| ID | 7105055 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 8801 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011726 |
|---|
| Strand | + |
|---|
| Start bp | 1334305 |
|---|
| End bp | 1335561 |
|---|
| Gene Length | 1257 bp |
|---|
| Protein Length | 418 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 643474369 |
|---|
| Product | O-antigen polymerase |
|---|
| Protein accession | YP_002371506 |
|---|
| Protein GI | 218246135 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3307] Lipid A core - O-antigen ligase and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTGGAAA ATTGCCTAAA ATTTGGACTG TTTCTTCTGC CCTTTTCCGC CGATCTTGGA
GTAGCATCTC TCGTTATTGC TTTATTTGTC CAGTGGAAGC AACAGTACCC TAAAATTATC
GCCCATCGAC CCTATCGTGG GTTAGGGTTA TTGAGTCTTT GGCTAATTCT GACCACCCTC
TTCGCCGTTC AACCCATTCA GGCCTTAGAA GGACTGCCTA ATTTGTTACC CGGTATCGCT
GTATGGGCAG CTTTTAGTTT ATTTTTTACC AGTTTTTCGC GGTTATATTC CCTAGCTTGG
TGGCTAGTGT TAACCGCCAT TCCTCTATCC GGGTTAGGAT TTCTACAATT AATCTGGGGG
TGGGAAAGTC CCCTCTTTTT AAGGGCGATT GGCATTAAAT TAGTCGCCTA TGGCAACCCC
GATGGACGAA TGTCTTCCTT ATTGATGTAT GCTAACATTT TGTCCATTTA TCTGTTGATT
ACCTTTCTTT TAGGCATGGG TTTATGGATT CATACCTACC GTCTTTGGCA AAAGAAAAAG
GAAACCGGGT CACTAGGAAA ACTGGCAATT CTAACCCTAG GGGTGTTAGG GTCAGGTATT
GGGCTAATTT TAACCAATTC CCGCAGTGTT TGGGGCTTAG CCCTCTTGGG AGTCATGGCA
TTTGCCCTGT ATTTGCGTTG GTATTGGATT TTAGGGATAG CTGTGATCGC CGTTGGGGCA
GTGTGTTGGT CTGCCTGGAT TCCCTGGGGA CAGGAAACCA TGCGTCAAAT CGTTCCGGCC
TATTTTTGGG CAAGGCTAAC CGATGAATTA TACGATGATC GCTATGTGAC GGCCTTGAGA
ACCACACAAT GGTCAGTGGC CTGGGATATG ATGTTACAGC GTCCTTGGTT CGGGTGGGGA
CTGCGTAATT TTACCCCAGT GTATCAAGAA CGGATGAATG TTTGGATGGG ACACCCTCAC
AATTTATTTT TAATGCTACT CGCAGAAATT GGTATTCCTG GAACCTTACT GTTTTGTGGA
TTAGTTGCCC AAGTCCTGTT TAAAGGATCT CAGCAATTAA TTCCCTGGCC TAACAAAAAA
GAAATAGACC CCGATCATTT ACTCTTATTT ACCTATTTAG TCACCTTTAG TGGCTGTATT
TTATTTAATA TCTTTGATGT GACCATTTTT GATATCCGGG TGAATCTTCT CGGCTGGTTT
CTCTTAGCAG CAATTACAGG CATTGTCATC GTAAAACCGC AACAGGTCAT GGGGTGA
|
|---|
| Protein sequence | MVENCLKFGL FLLPFSADLG VASLVIALFV QWKQQYPKII AHRPYRGLGL LSLWLILTTL
FAVQPIQALE GLPNLLPGIA VWAAFSLFFT SFSRLYSLAW WLVLTAIPLS GLGFLQLIWG
WESPLFLRAI GIKLVAYGNP DGRMSSLLMY ANILSIYLLI TFLLGMGLWI HTYRLWQKKK
ETGSLGKLAI LTLGVLGSGI GLILTNSRSV WGLALLGVMA FALYLRWYWI LGIAVIAVGA
VCWSAWIPWG QETMRQIVPA YFWARLTDEL YDDRYVTALR TTQWSVAWDM MLQRPWFGWG
LRNFTPVYQE RMNVWMGHPH NLFLMLLAEI GIPGTLLFCG LVAQVLFKGS QQLIPWPNKK
EIDPDHLLLF TYLVTFSGCI LFNIFDVTIF DIRVNLLGWF LLAAITGIVI VKPQQVMG
|
|---|
| |