Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PCC8801_1197 |
Symbol | |
ID | 7104897 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 8801 |
Kingdom | Bacteria |
Replicon accession | NC_011726 |
Strand | - |
Start bp | 1245238 |
End bp | 1246947 |
Gene Length | 1710 bp |
Protein Length | 569 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 643474282 |
Product | MscS Mechanosensitive ion channel |
Protein accession | YP_002371420 |
Protein GI | 218246049 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0668] Small-conductance mechanosensitive channel |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATATTAA GAAAGCAGTA TTCCCTCTTG ATTCATTCCC TGATTTTGAT CGTCAGTGCT TGTGTAATTG CCCTGATCAT AGCATCGATT CCTGTTAATG CTCAATTATA TTCTAACCAA CAACAGATAG GGACATCTCC AAGTACGACT ATCGGGGAAC AAACCCTAAT TAGGATGGAA CCTGTCAAAC TTGATGGTCG CACCTTATTT ATGATAGCAG GAATGGGTTC CAATGATGGA AAAGAAACGG CATCTTTAGA TAACCGAGTA GACTTTATTG AAGACGCTTT ATATAAATTT TTAAAAGAAG ATTTCAATGT AGAAAGTTTA CGAGTTGAAG TTCACGATAA AGGCGATCAT ACCAAAATTG TTGCTTCAGA TAATGGCAAT TTTAAGGATG TCCCTTTGTT TATTCTAACA CCTTTAGATG CGAGAGTTGC TGGATTTACC TTAGCGGAAT CCTCTAATTA TATTGCCACA GCTACAGAAA AAGCTCTTAA AAAAGGATGG CAAGAAAGAC AAACAAACTA TCTAGAAAAA CAAGTTAAAT TTTCAATAAT TTTAGTCTTA ATTGGCTTAT TTGTAAGCTC GATTATCTGG TTATGGCAAC ACAAAATTAA ACAAAGAGAA GCCATTTTAC GAGAACAAAA AATGGAATGC GATCGCAAAA TAACTGAAAA TACAATGTCA GTAGAAATGG ATGAAGACGA AGAACATTCT AGTGGATTTT GTCAAAAACT AGCAACAGAA CAACTGCATA ATCGTCAAAT GTTGGATAGA AAAGGGTTAC AAAGGTATTT ATTACAAGTG ACTCAAGGAG CAATTTGGAT TGGGATTATT GCTTGGATTT TAGAACTATT TCCTTATACT CGTGCTTGGA GGGGAACGGT TTTACAATTA CCCTTATTAT TCGGTGTTCT ATTACTAGCA ATTGCTGCGG CTAAATGGAG TGGTATTTTA GTTGATCGAA CCCTAGAAAA ATGGTTACGA TATCGTCAAA ATCTTTCCCC AGAAGCGATA GAAAGATGGT TACTTCGCGC TAATAGTTTT GCCCCAATCA TTAAAAGTAT CATGGCAACG CTAATTATCA TAATAGCGGT CTTATTTGTT CTCTCTCAAT TGGGTATTCC TTTAACCCCC ATATTAGCAG GAGCAGGAAT CCTAAGTTTA GCCATTTCTC TCGGTTCTCA ACGCTTAATT GCTGATCTCA TTAGTGGAAC ATTAATTTTA ATTGAAGATC AATATGCGAT CGGCGATTTT GTGACCCTTA ATGATAATTC TTTTGGTCGT GTTGAACGCC TAAATTTACG GTCTACTGCG CTACGAAATC GACAAGGAAA TTTAATTACA TTGTCTAATA GTGATATTAA ACAGGTTAAC AATCTCTCCA AAGATTGGGC AAGATCTAAA TTATATATTC CCGTTCATTT TAGTGCTAAT GTAGATATTG CCATTAAAGT TCTTGAGCAA GTGATTGAAG ACATGAAAGC GGATGATTTT TGGAATAGTT TGATTCAAGA AGCAGAAGTA CGAGGGGTTG AAGATATTGA TGGTTATGGG TTTACTGTTG GGGTAAGATT TCAAACAAAA CCAGGGATAT TTCGTAAAGT TATTCGAGAA TATCGTCGTC GTCTGAAACC TGCTTTTGAT CAAGCGAATA TTCGCTTTGC TGAACGTCCC GTTTATCAGT CAGGACAAGT CAATAATTAA
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Protein sequence | MILRKQYSLL IHSLILIVSA CVIALIIASI PVNAQLYSNQ QQIGTSPSTT IGEQTLIRME PVKLDGRTLF MIAGMGSNDG KETASLDNRV DFIEDALYKF LKEDFNVESL RVEVHDKGDH TKIVASDNGN FKDVPLFILT PLDARVAGFT LAESSNYIAT ATEKALKKGW QERQTNYLEK QVKFSIILVL IGLFVSSIIW LWQHKIKQRE AILREQKMEC DRKITENTMS VEMDEDEEHS SGFCQKLATE QLHNRQMLDR KGLQRYLLQV TQGAIWIGII AWILELFPYT RAWRGTVLQL PLLFGVLLLA IAAAKWSGIL VDRTLEKWLR YRQNLSPEAI ERWLLRANSF APIIKSIMAT LIIIIAVLFV LSQLGIPLTP ILAGAGILSL AISLGSQRLI ADLISGTLIL IEDQYAIGDF VTLNDNSFGR VERLNLRSTA LRNRQGNLIT LSNSDIKQVN NLSKDWARSK LYIPVHFSAN VDIAIKVLEQ VIEDMKADDF WNSLIQEAEV RGVEDIDGYG FTVGVRFQTK PGIFRKVIRE YRRRLKPAFD QANIRFAERP VYQSGQVNN
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