| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC8801_1005 |
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| Symbol | |
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| ID | 7104232 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cyanothece sp. PCC 8801 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011726 |
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| Strand | + |
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| Start bp | 1058252 |
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| End bp | 1060255 |
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| Gene Length | 2004 bp |
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| Protein Length | 667 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 643474097 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_002371237 |
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| Protein GI | 218245866 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGATAT CAAGATTAGT CAAACAAACC TTAATATTTG CTGCCCTTGT ATTTGCAGTA
ATTGGGATTT CTTTGTCTAT TTTTTCAGTG TGGAATTTGA GTCAAAATTT ATTATATGAG
TATGAAAATA AGGGATCAGC AATGACAAGA ACAATTGCTG GTTTTACCTC TGAAATCATT
TTTGATGAAA ACCATGAAAC CATTCAAGCA CTCGTAGATT CCTTTGTTGA TATTGAAGGA
CTTGCTTATA TTCTTGTTCA AGATCAAACA GGAGCAATTA TTGCCCATAC TTTTAGTCCA
GGAATTCCTA AATTTTTTCA AGATCATGAA AAGTATAAAT TAAATCAAAT CAATCAAAAA
AATTATAGAT TTACCCAACA AACTAAGATT GAAAAATTAA CTATCCCAGA AATCGGTCCA
ATTATAGATG TAGAACTTCC CATATTAGGT CTTGCAGGAG GTGATATCCA TTTAGGATTG
TCACGTCATA TTATTAACCA AAAAATTTGG TTAGCAACCA TTGAACAAGT CATTATTATC
ACCATTCTTT TTATTTTAAC TGCTATAGCT GCCTACATGG TTGTTAAACA AATTTCTCAA
GATTTAAACA AACTAATTAA AGGGGTTAAC CGAGTTCAAC TAGGAGATTA TGGAGTCACT
ATTTCCGTCA ATGATACTAA CGAAATTGGG CTATTAGCTA ACGCTTTTAA TAGCATGGTG
GCAGAAATTC GTCACTATGC TCAGCATTTA AACAAATCTG TGCAAGAATT ATCAGATATT
AAATATGCCT TAGATCAATC AGCTATTATC GCTATTACTA ATGTTCATGG AACCATTATT
AAAACCAATG ATAGAATGTC TGAAATTTCT GGATATTCTG AACAAGAGTT ACTGGGTAAT
AATCATCGGA TGCTGAAGTC TGGTTATCAT CCTCCTGAAT TTTTTGCTGA TTTGTGGTCA
ACAATTACTC GTGGAGAAAT TTGGCAAGGA GAAATTAAAA ATAAAGCTAA AGATGGTAGA
TATTACTGGG TTGATACAAC CATTGTTCCT TTTAAGAATG AAATGAGAGA AATTTTTCAA
TTTCTCTCAC TGCAAAATGA AATTACTACT CGCAAAGAAT TTGAAGAAAG TCTCGAAGAA
AACGTCAGAA AAAGAACTGA ACAACTGGCA CAAGCTAATG AAGAAATTAC CATGCTGAAT
GTCCAACTAA AAACCGAAAA TTTCCGCATG GGGGCTGAAC TTAATCTACT GCGTCAAATG
CAGCAATTGA TTCTTCCTAA AGCTGAAGAA ATTTCAGTAA TCGAAGAATT AGATATTGCG
GGATTTATGG AACCAGCTAG CGAAGTTGGC GGTGATTATT ATGACGTTTT GTATACGGAT
GGAGTGGTAA CATTAGGAAT TGGAGATGTT GCCGGTCATG GTCTAGAAAG TGGTATTTTA
ATGGTTATGA TCCAAACGGC TGTCCGTACC TTAACTGAAA TTAAAGAAGC TGATCCTGTT
AAGTTTTTGT CAACCTTGAA CCGAACAATT TATAACAATA TTCAACGCAT GAATTCTGAT
AAAAATTTAA GCCTAGCAGT CTTGAATTAT ACGGCAGGAC AACTCAGAAT TACAGGACAA
CATGAAGAAA CGTTGATAGT ACGTTCTGAT GGTAAAATTG AGCGTATTAA TACGATGGAT
TTAGGGTTCC CTATTGGGTT AGATCACGAC ATTACCCAAT TTATTGATCA AGTTTTAATT
GAGTTAAACC CTGGAGATGG GGTCGTTCTT TATACCGATG GGATCACTGA AGCAAAAGAT
ATTAACAAGA ACCAGTATGG ACTAGAGAGA CTTTGCCGAA TTATTAGTGA GAATTGGAAT
AAATCAGCCC AACAAATTGA AGAAGCTGTG ATTGATGATT TATTAAACCA TATTGGTCAA
CAAAAAGTCT TTGATGATCT AACTTTGGTC GTTGTTAAAC AAAAGAAAAT CCTAGATGAT
GCAGAGTGGA TAATAGATAA CTAG
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| Protein sequence | MKISRLVKQT LIFAALVFAV IGISLSIFSV WNLSQNLLYE YENKGSAMTR TIAGFTSEII
FDENHETIQA LVDSFVDIEG LAYILVQDQT GAIIAHTFSP GIPKFFQDHE KYKLNQINQK
NYRFTQQTKI EKLTIPEIGP IIDVELPILG LAGGDIHLGL SRHIINQKIW LATIEQVIII
TILFILTAIA AYMVVKQISQ DLNKLIKGVN RVQLGDYGVT ISVNDTNEIG LLANAFNSMV
AEIRHYAQHL NKSVQELSDI KYALDQSAII AITNVHGTII KTNDRMSEIS GYSEQELLGN
NHRMLKSGYH PPEFFADLWS TITRGEIWQG EIKNKAKDGR YYWVDTTIVP FKNEMREIFQ
FLSLQNEITT RKEFEESLEE NVRKRTEQLA QANEEITMLN VQLKTENFRM GAELNLLRQM
QQLILPKAEE ISVIEELDIA GFMEPASEVG GDYYDVLYTD GVVTLGIGDV AGHGLESGIL
MVMIQTAVRT LTEIKEADPV KFLSTLNRTI YNNIQRMNSD KNLSLAVLNY TAGQLRITGQ
HEETLIVRSD GKIERINTMD LGFPIGLDHD ITQFIDQVLI ELNPGDGVVL YTDGITEAKD
INKNQYGLER LCRIISENWN KSAQQIEEAV IDDLLNHIGQ QKVFDDLTLV VVKQKKILDD
AEWIIDN
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