Gene PCC8801_0542 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC8801_0542 
Symbol 
ID7105678 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8801 
KingdomBacteria 
Replicon accessionNC_011726 
Strand- 
Start bp560130 
End bp560696 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content45% 
IMG OID643473646 
Productphotosystem I assembly protein Ycf4 
Protein accessionYP_002370789 
Protein GI218245418 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGCAC CTGCTATGAC AAGCGATCGC CTCGTTTTAC GCGAAGAAGT ATTAGGGTCC 
CGCCGCTTTA GTAATATATG GTGGGGAACT GTTGCAGCCA TAGGAGGAAT AGGCTTTCTT 
TTAGCCGGAC TTTCGAGTTA TTTAAGGGTT AATCTCCTCA TTGTTAGTGA TACAAGCCAA 
TTAGTCTTTA TTCCCCAAGG TATCGCCCTA TTATTCTACG GGATAGCCGG ATCAGCCCTC 
TCCCTTTACC TCTGGTTTAC CATTATTTTA GATATTGGCG GAGGATACAA CGAATTTAAC 
AAAGAAACGG GAAAAGTCAC CATTTTTCGT TGGGGGTTTC CTGGGAAAAA CCGTCGCATT 
GAAGTCTCTT ATCCCCTAGC AGATATCCAA GCAATTCGGG CTGACATCAA AGAAGGGTTA 
AATACCAAGC GGAAGCTATA TATTCAACTG AAACAACGGC GAGAAATTCC CTTAACTCGC 
GTGGGAAGAC CGATTTCTCT CTCAGAATTG GAAAACCAAG GCGCAGAATT AGCCCGCTTT 
TTAGGGGTTC CCCTGGAAGG GTTGTAA
 
Protein sequence
MNAPAMTSDR LVLREEVLGS RRFSNIWWGT VAAIGGIGFL LAGLSSYLRV NLLIVSDTSQ 
LVFIPQGIAL LFYGIAGSAL SLYLWFTIIL DIGGGYNEFN KETGKVTIFR WGFPGKNRRI 
EVSYPLADIQ AIRADIKEGL NTKRKLYIQL KQRREIPLTR VGRPISLSEL ENQGAELARF 
LGVPLEGL