| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC8801_0316 |
|---|
| Symbol | |
|---|
| ID | 7104041 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 8801 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011726 |
|---|
| Strand | - |
|---|
| Start bp | 309500 |
|---|
| End bp | 311065 |
|---|
| Gene Length | 1566 bp |
|---|
| Protein Length | 521 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 643473425 |
|---|
| Product | glycoside hydrolase family 10 |
|---|
| Protein accession | YP_002370571 |
|---|
| Protein GI | 218245200 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3693] Beta-1,4-xylanase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGATACAAC GTCGTCGCTT TTTAGAATTT ACAGCAGGAT TAACTCTTTT TCCTCTGATT
TCTCAACCCT CTAATTCTGA AACTGTCAAA AATGCTTCCC AAGAAACAGT TACTTTACAA
GGATGGGATT TTCAAGGGAT ACCTTTAGAT CAGTCTGGAT GGGAAACGCT GCATTTTTTG
GATTTAGAAG AAAACCCGAT TTTTAATCCT CCTCGTCAGG TAGAAGGCGG AAAATTGATC
TCTTCTTTTC CTCCCTTTCC TGTCATGATT GCCATTAACT TATTAGTGTC TGGTTTTGGC
AAAGTTTATC TTTATGCTGA TAACCAAGGA AAAGGCTATA CTATTGCTGA TTTCCCTCTT
AATCTTAACC TAGAATTGAC TCGGACTCGT TGCGATCGTG TTCAGTCTTT AATTAATACC
TGGAAACAGC AAGGTTATAC TTCTGCTTCA ACAGTAATTA ATCGTCTCAA TCAAGCTTTT
TTTTATCTAA AAAAAGCAGA AAATAGCTCG TCAATCACCG AACAAATCCC ATGGTGTCAA
CAGAGTTTGG TTGAGAGTTT ATGGAGTGGA GAAGAAGCGG TTTTAGCCCA TGCAAAATAT
CAAATTTCTC AGCAAGAAAA GCGTCCTAAT TTTCTATTTG GCTGTGGGTT TCCCTATGGG
GGAGAAACGG ATAAAGCTTA CTTTAAAGAG GTTTTTAATT TTACAACCCT TCCCCTATAT
TGGCGAGATT TAGAAAAAAA ACAAGGTCAA AAAAATTATG AACCCCTCAA TCAAATGCTC
GATTGGTTAG AAGAAAATAA GATTACCCCA AAAGGCCATC CCTTAGCTTG GTTTGCTGAA
TTTGGCATTC CTGAATGGTT AAAAGATACG AGTTTTAAAA CGATGAAAAG AGAACTTGAT
TTACATATTC AAGAAGTGAC TCGATATTTT GGTCAACGAT TTCCCTATTA TGATATTATT
AATGAAGCTA GTGGTCGGGC TTTTGCCAAT CAACCGGGTT ATTCTTCAGA AGAATTAGTG
GAACTTTCAG GGGTTACTGC TACTGCTTGT TATCAAGGTA ATCCCCAAGC TTTTCGTATT
ATTAATGATT GTTGTTTGTG GGCTAGACAT CGTGCTTTAG AACAACCAAA TCCTTTGACC
CCTTATCAAT ATATAAAAGC TTGTTTAGCT GCTAATATTC CCTTTGAAGC TATTGGATTA
CAGCTTTATT ATCCTGACCG GGATTTGTTT GAAATTAATC GCTTAATAGA ACGGTTTGGA
CAATTAGGAA AAATTATTCA TATCACCGAA TTAGGAGTAC CCTCTGACAC CACAGAAGAT
GAAAATTCTT GGATGAAAAC GCCCTTTGGT TTATGGCATA ATCCTTGGTC AGAAACGATT
CAAGCGGATT GGATTGAACA GTTTTATACC CTGTGTTATA GCAAATCGTA CATTAAGGCT
ATTACTTGGT GGGAATTATC CGATAAAGGC TATCATTTTT GGGCTCATGG GGGACTTCTT
AGACCTGATG GACAACCCAA AGAAGCTTTC TATCGTTTAA AAAGCTTAGT TCAACAATGG
AGATAG
|
|---|
| Protein sequence | MIQRRRFLEF TAGLTLFPLI SQPSNSETVK NASQETVTLQ GWDFQGIPLD QSGWETLHFL
DLEENPIFNP PRQVEGGKLI SSFPPFPVMI AINLLVSGFG KVYLYADNQG KGYTIADFPL
NLNLELTRTR CDRVQSLINT WKQQGYTSAS TVINRLNQAF FYLKKAENSS SITEQIPWCQ
QSLVESLWSG EEAVLAHAKY QISQQEKRPN FLFGCGFPYG GETDKAYFKE VFNFTTLPLY
WRDLEKKQGQ KNYEPLNQML DWLEENKITP KGHPLAWFAE FGIPEWLKDT SFKTMKRELD
LHIQEVTRYF GQRFPYYDII NEASGRAFAN QPGYSSEELV ELSGVTATAC YQGNPQAFRI
INDCCLWARH RALEQPNPLT PYQYIKACLA ANIPFEAIGL QLYYPDRDLF EINRLIERFG
QLGKIIHITE LGVPSDTTED ENSWMKTPFG LWHNPWSETI QADWIEQFYT LCYSKSYIKA
ITWWELSDKG YHFWAHGGLL RPDGQPKEAF YRLKSLVQQW R
|
|---|
| |