Gene PHATRDRAFT_51303 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_51303 
Symbol 
ID7199460 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011701 
Strand
Start bp10530 
End bp12152 
Gene Length1623 bp 
Protein Length222 aa 
Translation table 
GC content49% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002185593 
Protein GI219130905 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGATTAT TTCTTACGCA ATATACATTC TCACGAATTT GTTCATTCTT CGTTATGCTA 
GGATGGCTCA AAGGATGTGG GGAACAACCT CGAGGCAAAA GCTGATGTGG AGGATAGGAG
AACCAAAGAG GGTGCTGCAG AAGTGGTCAC TGAGACCAGT AAGGAAACAA CCGAAGAAAA
GGAAGCATTC GAAGTCAACC ATGCAGAGAC GGAAGTTTCA GAAGAAACAA TCGCTTCTGA
AGCCAAACGT ACCGACGTCG AACCGTTAGC TGATGGTCAA CGTAGCAAGC GCGTGTACGT
TGGCAACCTT ACGTTTTCTG TTTCGTGGCA AGATCTGAAA GACCATATTA AGTCCACGGG
ATTGGACGTG ACTAAAGCCA ACGTCATGTC TGGCCCAGAT GGTCGTTCCA AAGGCTGTGG
TATTGTTGAG TTCGCGACGG TTGAAGCTGC TCAGCAAGCA GTGTTGACGC TCAACGATAC
CGAGCTCAAG GGTCGTCAGA TTTTTGTGCG AGAAGACCGT GAAATTAAAA GCGGATCCGG
TAATTTTCAA ATCGGTGCTG CGAGCGCTGG GGGACAAAGA TTCTCATCAG AAGAGCATGC
GCAGAATAGG CGTGTTTATG TCGGAAACTT GAGCTGGTCA GTCGCCTGGC AAAGCTTAAA
GGACCACATG CGCCAGGCGG GCGAAGTCGT TCATGCTGAA GTTATTATGG AATATAACGG
ACGGTCCAAA GGATGCGGAA TCGTCGAATA CGCGACGGAT GAAGAAGCAC AGGAAGCCAT
CAAAACGCTG ACAGATACAG AGCTGAACGG GCGAATGATT TTCGTTCGCG AAGATCGAGA
AACACCGAAT CAAGGAGCGT CTTATCAAGG TACCTATGAA CGCACACAAA GCACATCCGT
GTATGTGTGG AATCTTGCCC CGGGAACATC GTGGCAGGAT TTGAAGGATC ATATGCGCAT
GGCCGGAAAT GTAGACTCGG CGACAGTCAT GACGAATGCA GATTCTTTGT GCTGTGGTGT
TGTTGTATAC CAGCGTCCCC AGGAGGCTGA AAGGGCAATT CGTGAGCTGC AAGGCACAGA
CTTGAATGGC AGTGCCATTT CAATTCGTGA GGATAGAAAG CAGGTGAATC GCGGGGCTGG
ATCGGGTCGT GGCGCGGTCG TGGGCGTGGA GGGCGTGGTA TATCATCTTA CGGCGGTGGA
CGTGGTATAG GCCGCCTCAA TGTTGACGCG GAGACACAAT TATTCGTAGG CAATCTCGCT
CAGTCGACGA CCTGGAGGGA ATTGAAGGAC CATTTCCGCC AATGCGGTGA CATTCAACGT
GCGGAAGTCA AAAACGGGCC GGCTGGGCAA TCTAAAGGTT TCGGGACAGT TCAATTTTTG
AAGAAGTCAG ATGCCAAGGA TGCTATCACT CAACTCAATG GTAGCGAGCT TCAAGGCAAT
GTTATAGAAG TGCGGCTCGA CCAGAAAGCT CGCTAAATGG ATAATCTGCT CCTAGTGGAA
TGTGCTTGCG AAAACCTTTG CTTAATAAAT GGTGCGAAGC GTGTCTTTGT AAGGCCTCTT
CGCTCACATG AGAGAGGCAC GGAAGGGTAC AGTTAAAACT ATTAAAACGG TCTATAAATG
TGT
 
Protein sequence
MRLFLTQYTF SRICSFFNRR VYVGNLSWSV AWQSLKDHMR QAGEVVHAEV IMEYNGRSKG 
CGIVEYATDE EAQEAIKTLT DTELNGRMIF VREDRETPNQ GASYQGESRG WIGSWRGRGR
GGRGISSYGG GRGIGRLNVD AETQLFVGNL AQSTTWRELK DHFRQCGDIQ RAEVKNGPAG
QSKGFGTVQF LKKSDAKDAI TQLNGSELQG NVIEVRLDQK AR