Gene PHATRDRAFT_51301 details

Gene Information

• Locus tag: PHATRDRAFT_51301
• Symbol: helicase_5
• ID: 7199418
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011700
• Strand: +
• Start bp: 18444
• End bp: 20749
• Gene Length: 2306 bp
• Protein Length: 428 aa
• GC content: 47%
• Product: predicted protein
• Protein accession: XP_002185552
• Protein GI: 219130818

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ACTAACGCTG CCAAACTACC CAAGGCCTTA CATTAGTAAC TTGACAACCT TTAGGATTCG 
TTTTCATCTG CAACACTCCA TCGAATCAAT ATGGCGGACA ATGATGACGA TCTCGTTGAC 
TACGATGAAG AAGAGGTTCG TAGAGAATGC GTGTACGAGT TAGTACGCAT GCGTTGATCG 
GATGTGTTTC GAAACCTGCG CCGATCCTCG TTGTTCTCAC GATTGGCTTT TTGCCTTTCG 
TATACTCACA CATGCATACA TACAAACAAA CACACACTGA CTTACTCATC CTATGTTCGT 
TGGCATCCAG GTCGTACCCG AAGTCGCCAA AGATGCCGCT GCAGTGGGAG GCGACGGCAA 
AGAAAGTAAA AAGGGTCACT ACGTAGGAAT TCACGCCTCC GGCTTTAAGG ATTTCCTACT 
CAAACCCGAA TTGCTTCGCG CCATTGTGGA CGCTGGTTTC GAGCATCCCT CGGAAGTGCA 
GCACGAGAGT ATTCCCCAAG CTGTACTAGG CGGAGATATT GTTTGTCAGG CAAAGTCGGG 
AATGGGAAAG ACGGCAGGTA CGTGAAGGAG CGTTAGGTGT GACTGTGAAT ACCATTGGAT 
TTGGCTGGCG ATTCCTCCCA TCCGTCCGCC TTAAACGTAC GAAATATCAC GACAACAAGC 
CAAAAGCTAG AACTTTCGTC GCTCACCTCA ATCGTTCCGG CTTTCATCAG TCTTTGTGCT 
CGCAACTCTG CATCAGTTGA ATCCGTCCGC CGAATCGGAA GACGTCCAAG TCCTTGTGCT 
CTGTCACACG CGTGAACTCG CATTCCAGAT CGCCCACGAG TACGAACGCT TTTCAAAGTA 
CCTCCCATCC ATCAAGACTG CTGTTTTCTA CGGTGGCGTC AATGTGACTC AGAATCGCGA 
CATTCTGAAA AAGGAACATC CGCACATTGT CGTTGGAACT CCGGGGCGTA TTCTCAAATT 
GGCTCGTGAC AAGGATCTGA AGCTTTCTTC TCTCAAGCAT TTTGTACTCG ACGAATGCGA 
CCGCGTTCTC GAGTCACTAG ATATGCGCCG GGACGTCCAA GAGATCTTCC GCATGACGCC 
ACACGAAAAA CAGGTCTTGT TGTTCAGCGC TACCTTGTCC AAGGAAATCC GTCCGGTTTG 
CAAAAAGTTT TGCCAGGACC CGATGGAGAT CTACGTTGAT GACGAAACCA AACTGACCCT 
GCACGGATTG CAGCTTTATT ACGCAAAACT GGCCGAGGCA GAAAAGAACA AGAAACTCAA 
CGATCTGTTG GATGCCTTGG AGTTTAACCA GGTTGTCATC TTCGTCTCCA AAGTCGCCCG 
TGCGAAAGAG TTGAATCGTC TCTTAACGGA ATGCAACTTT CCTTCCATCT GCATCCACGC 
CGGTATGCGG CAAGAGGAAC GCATCAGCAA ATATAAATCC TTTAAAGATT TCAACGCCCG 
TATTCTTGTC GCGACTGATC TGTTTGGTCG GGGTATTGAT ATTGAACGCG TCAACGTGGT 
CATCAATTAC GACTTTCCGG ATGATTCCGA TCAGTTCTTA CACCGTGTGG GCCGCGCGGG 
ACGTTTTGGT ACCAAAGGGA TTGCCATTTC CTTCATTAGC TCCGAAGCGG ATCAAACCAT 
CCTTTCGCAG ATTCAGTCGC GGTTTGAAGT TAACATTCCC ACGTTGCCGG ATGAAATTGA 
TATGAGTACT TACATGAGCA CCTAAAGCTC CGCATTGGGC ATTGCAGGAG AAAAAATTGG 
AAGTTTCGAT TGAAAAAGAC TGCCTAACTG TAAGATTGCT TTTGCGGAGG GATTATAGGA 
TAAGTGTTTT TGTGGTCAGG ACAGGCAACT AGCGTTTTGG AACAAACCGA GATTTTTTTT 
TGGTTACAGA AAAGTTAAAT TAGAGGTCTG CTTTGATGTG TTTGGGGAAA CACAAAGGTT 
TAAAATATGT TGATCTGGCT TTTGATCGTA AGAAGGCCTC GAAGCTCGAT AGAAACGTTT 
TCTTCTGGCT CTGTCCAGTT TTGATTTTCA CTGTCAAACA GGCGACGCAC CAACTCGTTT 
ATTCGTTTTC ACAAAAGTAC GGTATTTTTT ATCAAGATGG CATTTTTGAT TTACCTCGAC 
AGGATTTAAA GCCTACGTTT GATTTGTTCC AAAGCATGCG CAAGCATTTC AGCCGTCGGC 
CTTTTACTTG GCAACGGACT CAAGCAAGAC CCAACTATCC TGCTGAATAC TTGCATGTCC 
TCGTTGGCAA CTGGTCCGGC CCAGCGATCA GGTGTTAATG CATGTTGCGG CAAAACGCAA 
TCGTAGTAAA CATCACGAGA GAGCCT 

 

Protein sequence

MADNDDDLVD YDEEEVVPEV AKDAAAVGGD GKESKKGHYV GIHASGFKDF LLKPELLRAI 
VDAGFEHPSE VQHESIPQAV LGGDIVCQAK SGMGKTAVFV LATLHQLNPS AESEDVQVLV 
LCHTRELAFQ IAHEYERFSK YLPSIKTAVF YGGVNVTQNR DILKKEHPHI VVGTPGRILK 
LARDKDLKLS SLKHFVLDEC DRVLESLDMR RDVQEIFRMT PHEKQVLLFS ATLSKEIRPV 
CKKFCQDPME IYVDDETKLT LHGLQLYYAK LAEAEKNKKL NDLLDALEFN QVVIFVSKVA 
RAKELNRLLT ECNFPSICIH AGMRQEERIS KYKSFKDFNA RILVATDLFG RGIDIERVNV 
VINYDFPDDS DQFLHRVGRA GRFGTKGIAI SFISSEADQT ILSQIQSRFE VNIPTLPDEI 
DMSTYMST