| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_50614 |
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| Symbol | |
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| ID | 7199448 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011700 |
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| Strand | + |
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| Start bp | 86298 |
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| End bp | 90042 |
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| Gene Length | 3745 bp |
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| Protein Length | 1123 aa |
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| Translation table | |
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| GC content | 47% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002185564 |
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| Protein GI | 219130843 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CTTCTTTTCG ACAACAACAT TGTCCTTCAA CTATCCCTGA AACGTAATGA GAAAACGGAT
GACGACTGAG CACCATTGTC TGTCGTGATC CCTGATCGCC TGACCGAGAG TCTCGTTTTC
CCTCGATTCG AGGGCGTCTC GGTGCGGAAC TTGAAGCTTG CGAGCGCTTG CCGCGTCAAA
ACTATGCCTG ACGTCGAACA GCATCGTAGA CAGTCGAGTA ACGCTGAACT GTCTTGGTCT
GAAATCAGCC AGCTTACGGA TGAGAATTGG CAGTATATAT CGGAGGATAG CCGGAGTGGA
ATTGTGGAAA TCTCCCGGGC GGGTAATCTG ACTTTCTCTT CACTCGATTT GTACGGGCGC
GAAAAGGAAA TATCCACTTT AAAGGAAGCG TTCGATCGTT CCCGTTCATC GCGAGAATTG
CTCTTAATCT CTGGACAATC TGGAAGCGGG AAGTCCGCTT TGGCATCGTG CGTGGAGCAG
CCTGTTCGTC AAGCCAAAGG CTTTTATTTG AAAGGAAAAT TCGACCTCAA TCAACAAAGC
CAGCCCTTTT CGGCCATCGT AAGCGCCTGC TCTCGCTTGT GTGAAGAATT GTTGCAACAG
GAAGAGGGAC TTTCATGTCC TGGCCGAGAA CAAAATAGCG GTTCTCGAGA AGAACGATCC
TCGAAGCAAT GGCAGTCTGT ATTTTCTTTA GACGAGATCA GAACTAGAAT GCACGAAGAA
ATGGCAAACG AGGTTGAAGA CCTTATTTTC GTAGTGCCCG GTTTAGCAGA TGTGGTGGGT
ATCGATGTGA TTCAGCCTTT GAATGATAGT ACAAAGGATG ACCCACTGGA AGCAAGAAAT
CGGCTCAATG CTGCTTTTCG AAAGTTCATT CGGGTTCTTG GTTGTTTCGG ACCGATAGCG
ATGTTTCTCG ATGATATGCA ATGGGCTGAT CTCGCCAGTT TGGAGTTGAT TGAATTTCTC
TTCACAGACC CAGAGAAGAC GGGCCTGCTT ATTCTGGGAT GTTATCGGGA TACTGGGTTG
GACGACACCA ATGGTTATCA AAAGCTACTA CGGAAGCTAA AGCGCAGAGA CGAAACCACT
ATTACTGAAA TAGAAGTCCG AAACCTTTCC GTTCGGTATG TCAATGAAAT ATTATCTGAC
TTGCTTCGCA CAGAAAAGGG GCGAACACTC CCTCTTGCTG AGCTAGTTCA TCGAAAAACA
CATGGAAACG CTTTTTTTGC TATTCAGTTC ATTAAATCTC TGGTTGATAG CCGGATTTTG
AAACCCTCTG ATAGTTCGGC ATGGGCGTGG GATCTAGAAC AAGCCGAAAA AAGCACGGAA
CCAACTTCCA ACGTGATCGA CCTTATGAAG AGCAAACTGA AGAAGCTGCC GTATGACGTT
TGCTTAACTC TGCAGCTCAT GGCATGCCTC GGATCAACTT TCACTTTCCG AGTCTTTCAT
CTAATTGTCG ACGAATTTTA CAACAACCCC TTGCATGTGG ATCCAACCAA ACTAGCTGTT
CAACCTCTCG ATCAGAGAAA GCCAGAGGAA TGTTTACAGC TCTGCGTAGA GCAGGGTTTG
ATTGTTGCTC ATCGGCGGCA TTCATATCGC TGGATTCACG ACAAACTTCA AGAAGCTGCC
CTCTCCCTTC TACCGAGCGA TAGTCTTCCG ATAGTTCAAT TTCGAATTGG CAATCTTTTG
CGGCAAAACC TGTCTTCCGT AGAGATAGAA TCATCCGTGT TTGTTGTTGC GGCATTACTC
AACGAAGGCT CAGAGGCACT TTTGACGGAT GAACAGAGGA TACAGATCGC TCATATTGAT
CTGGTTGCTG GCAAGAAAGC CATTGAATCT TCGGCATTCG TTTCCGCCAA GTACTATCTC
GAAAAGGGAG TAGAGCTTCT TCCAGTAGGA TCTTGGAATG AACATTACCG TTTAACTTTG
AATATCTATT CGACTGCCGC TGAGGCTGAA TACTGTAACG GAAACGCAGT CATGGTTGAA
CGATACTGTG ATGAGGTCCT CAAGCAGATA CACCGGCCTC TCCTTGATCG TCTTCCTGCC
TATAAAGTTC TAATTGAAAC CACCGGAGCG CAAGGAGATC ACAAAAAAGC TGCTCACCTT
ACTTTAGATG TTCTGTCGCA GCTTGGATGT CCGTTTCCAA AGTATGCAGT ACTGATACAA
GCCTATGCTG GCCTTCAAAA AGCTAGATTA TTCCAACGGA GACTTTCGAC AGAGAAGGTC
AATGGAATGC GGCAAATGAC GGATATCAAA GATATCTGGA TCATGTCTTT ACTTGACAAA
ATGTTTGCTT TTGCTTATGT TGGACGCTTG CCGAATATTT TGTTGATGTC TATTCTCAAA
AGCTTGCAAT GGACACTAAA GAAGGGACTG AGCGATTTTG CACCTTCTAC CTTCGCACGC
GTAGGGCTAG TTTTTGCGGC ATTCCTCAAC GATCCCAAGA CGAGCGAAAT GTATGCTGAG
CATTGCATGT CGCTTTTGGT CCGGACTTCG TCGCGGAAAG CAAAAGTCAA GGCGTCAATG
ATTGTGCAAT CGTTTGTTTT CCATTATTTG CGACCTTTAA GCTCAACTAC CCGACCGCTG
ACACACTCTT ACGAATTAGG AATGAAGATT GGTGCCATTG ATGACGCCAT GTGGTGCTTT
TTCTTCGCTC AAGAAACAAA GGTTCACTGC GGCGTCTCAC TCAATAGCAT TGCCGACGAG
CTAAGCGTGG CAATTAAGCA AATGCAAGAC CTAAAGCAAG TTAAACAGGA GGAACTCTGC
TACATACTCG AACGCGTGGT GTTGGACATG ACTGGAAATG CCCGAGATGC CCATCTGCTG
TCAGCCAAGT ATTTGGCGCA GGATGAACTA TTTGCTAGGC TACGACAAAC CGAGGACACA
ACAATGAAAA TGTATTTTTT GAGGAATCGC ATGGCCGTCG CATTTCTGTT TGAGAGGTAC
GATCTCCTCA TGGAACTACT GGAGGACACG GGCTATCAAA AATTTATAGA AAAGGCACAG
CCTGGAGTTT TTGCCGTGCA GTCCATGACA TTCCGAAATG CGTTAGCTTG TGTATCGGTG
TTTCATCGGA CTGGAGATCG CCACTATTTG AGATTGGCCA ACAGACTTGC TTGGAAAGTC
AAGAAAGCTG CGAAACAAAA TGTAGGTTTC GCTAGTCACT GTCAGTCTTG GTCACCTGTA
GTATGCCTTC GTCAATTTGG AACTCATTGC TCATTTGTGT CTGTTCAGAA TCCCAACCTT
TTTCACTACG ATGCTCTCCT GGACGCTGAG TTTGCAGCCA CCAACGGCAA GCATGCGGCC
GCACTAAAAC ATTTTGGCGC CGCGATTCTG TTGGCCGGAA GCCGGCGCTT CCAGAACGAC
CAAGCCTTGA TATACGAACG CTTTGGAGAA TACAACGACC GTGAAGGTCA AAAGGACGAT
GCTCGGTATA GTCTGCGACT AGCGATCGAA TCATATCAGG TCTGGGGTGC CCGTGGTAAA
GCCAATCAAA TTCGGCTTAA GCACGCGGGG CTGTTGACGC CTCCAGCTGA GATTGAGGTA
GGAGATTTCA ACCCTGACTT CCTTACTCTT CGCCACAAAT CCTTAGACAC TGCGCATGTG
AGGGGGACAG CACAAGTGGA GAAGCCTTTA GGTGCAGCGT AAGAGCCGAG ATGCCCTCAA
TGACTGGCAT CGTTGCCTCC CTTTGCCTAT CGTCACGCCG GTGACCTACA TCCAGCGTGG
CATCTGTTGC GTGATAGTAA ATTAG
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| Protein sequence | MPDVEQHRRQ SSNAELSWSE ISQLTDENWQ YISEDSRSGI VEISRAGNLT FSSLDLYGRE
KEISTLKEAF DRSRSSRELL LISGQSGSGK SALASCVEQP VRQAKGFYLK GKFDLNQQSQ
PFSAIVSACS RLCEELLQQE EGLSCPGREQ NSGSREERSS KQWQSVFSLD EIRTRMHEEM
ANEVEDLIFV VPGLADVVGI DVIQPLNDST KDDPLEARNR LNAAFRKFIR VLGCFGPIAM
FLDDMQWADL ASLELIEFLF TDPEKTGLLI LGCYRDTGLD DTNGYQKLLR KLKRRDETTI
TEIEVRNLSV RYVNEILSDL LRTEKGRTLP LAELVHRKTH GNAFFAIQFI KSLVDSRILK
PSDSSAWAWD LEQAEKSTEP TSNVIDLMKS KLKKLPYDVC LTLQLMACLG STFTFRVFHL
IVDEFYNNPL HVDPTKLAVQ PLDQRKPEEC LQLCVEQGLI VAHRRHSYRW IHDKLQEAAL
SLLPSDSLPI VQFRIGNLLR QNLSSVEIES SVFVVAALLN EGSEALLTDE QRIQIAHIDL
VAGKKAIESS AFVSAKYYLE KGVELLPVGS WNEHYRLTLN IYSTAAEAEY CNGNAVMVER
YCDEVLKQIH RPLLDRLPAY KVLIETTGAQ GDHKKAAHLT LDVLSQLGCP FPKYAVLIQA
YAGLQKARLF QRRLSTEKVN GMRQMTDIKD IWIMSLLDKM FAFAYVGRLP NILLMSILKS
LQWTLKKGLS DFAPSTFARV GLVFAAFLND PKTSEMYAEH CMSLLVRTSS RKAKVKASMI
VQSFVFHYLR PLSSTTRPLT HSYELGMKIG AIDDAMWCFF FAQETKVHCG VSLNSIADEL
SVAIKQMQDL KQVKQEELCY ILERVVLDMT GNARDAHLLS AKYLAQDELF ARLRQTEDTT
MKMYFLRNRM AVAFLFERYD LLMELLEDTG YQKFIEKAQP GVFAVQSMTF RNALACVSVF
HRTGDRHYLR LANRLAWKVK KAAKQNNPNL FHYDALLDAE FAATNGKHAA ALKHFGAAIL
LAGSRRFQND QALIYERFGE YNDREGQKDD ARYSLRLAIE SYQVWGARGK ANQIRLKHAG
LLTPPAEIEV GDFNPDFLTL RHKSLDTAHV RGTAQVEKPL GAA
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