| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_50325 |
|---|
| Symbol | |
|---|
| ID | 7199067 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011696 |
|---|
| Strand | - |
|---|
| Start bp | 308996 |
|---|
| End bp | 310537 |
|---|
| Gene Length | 1542 bp |
|---|
| Protein Length | 509 aa |
|---|
| Translation table | |
|---|
| GC content | 46% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002185256 |
|---|
| Protein GI | 219130194 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0839312 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTCTTCGCAT CAATGCGCCG TCCAACGAAA CGAAAGCTCT TAGATGTAGA AGGTCAAGTG
GAATCCGAAA GCCCTGAAAC GAAGGATCGT GGAAATGTAT ACCCTATCCA TTTGCTCGCA
CGAACAGTCG CAATCATTGT GATTGCGGGA ATCTTACTCT TCATGGCAAA TCATCAATTT
TTCTCCCAAA CCTGGACCCA CACACAATTA CGGCAGTCAC CGACAAAAAC GACTGGGAAA
CAATGCCGAG AACAAAAGAG ACCAGTCGTT TACGATTCGA AAGCACAAGC AGCCGGACGA
AAAAGCCGAT TTCCAAATGT GGAAGAGCGG ATTCGGGTAT ACATGTCAAA TTGGTACACA
CCACCGTGTG ACGACTTTCA TGATGGTTTC GTGCATTATG AATACTACAA AAATAATACA
GATCCCCTTT CGTCTTTTTA CACGATCGAC GAGGTAGCCT CTTTCAACAC GTCCCCAAAA
CAACGATCTT TCCACATCGA CTCCTCCATT AAGCCCGCCT TGATGTTTTA CGCAACGAGA
TACTTCCTGG ATATTTGTGC AAAGACGCTG ACGCCATTAC GGTTCTACTG TACAGACGGG
AACGAAACAA TTTTACACAC TATGCAACAG CTCGGTTGGA GCGAGCAATT TGAAGTAAGG
GTTGGGACGC CGCCATTACT GCTTCAATTC GGTGACGCCA AAGAGACTCA TGCTGTCGAA
TCAATCAGCG AATTACCCGT TTCTTCCTAC CCTAGAGTAC CTCACATCAA AAAGTTTCGG
CGCGCAATTG GCGAAAAGGA ATTAAAAAGT TTCAATGCAG AGGAGTGTAT TCGAACGCTC
AGGCCCGGTT TTCAAGATCA CGATCCATAC AGTCTACTAC CAATCGTTTG GAAACTGAAT
ACTAAGCGGC ACTACGGAGA TCTTTCCAAG ACGGCTTGTT TGGACATTCC CTGGTCCTCC
AAACAAAACT CCTCCGTATT TCGTGGAAAA CTTAACGGAG CCGCTATCTT CGATCCTATT
TCCAATGAGG AAAAATGCCT TCAGATGCCG CGTTGCCGCT TAGTTTATAC CCACGTAAAC
TCGACTTTGG TCGACGCCTT TCTCACAGAT ATGATGCATA AGTTACCCAG CAAGATAGCG
GACGTCCAGC TGACGACGTC TATCTTCTCA ATCCATGATT TGCTGAGATA CAAGGGACTA
GTAATGCTGG AAGGAAACGA TGTTTCATCG GGACTGAAAT GGGCCCTGTT ATCGAACTCG
GTCGTACTGA TGCCACGTCC AACCTTCACT TCCTGGGCTA TGGAAGAGCT GCTGGAGCCT
TGGGTTCACT ACGTTCCCTT GGATGAAGGG TTGACGGATG TTGAGGACAA GATGCAATGG
ATCGTAGAGA ACGACGCTGA GGCGCAGCAA ATCTCAAAGC GTGCCAGTCT TTGGATTAAA
GACTTGGTCT ACCATACAGA TTCCATGAAA GACGATCAAC TCGTTTTTAA GGGAATTCTC
GAACGTTACA GACAGCATTT TAGGAAGCGC CCGACAACTT GA
|
|---|
| Protein sequence | MRRPTKRKLL DVEGQVESES PETKDRGNVY PIHLLARTVA IIVIAGILLF MANHQFFSQT
WTHTQLRQSP TKTTGKQCRE QKRPVVYDSK AQAAGRKSRF PNVEERIRVY MSNWYTPPCD
DFHDGFVHYE YYKNNTDPLS SFYTIDEVAS FNTSPKQRSF HIDSSIKPAL MFYATRYFLD
ICAKTLTPLR FYCTDGNETI LHTMQQLGWS EQFEVRVGTP PLLLQFGDAK ETHAVESISE
LPVSSYPRVP HIKKFRRAIG EKELKSFNAE ECIRTLRPGF QDHDPYSLLP IVWKLNTKRH
YGDLSKTACL DIPWSSKQNS SVFRGKLNGA AIFDPISNEE KCLQMPRCRL VYTHVNSTLV
DAFLTDMMHK LPSKIADVQL TTSIFSIHDL LRYKGLVMLE GNDVSSGLKW ALLSNSVVLM
PRPTFTSWAM EELLEPWVHY VPLDEGLTDV EDKMQWIVEN DAEAQQISKR ASLWIKDLVY
HTDSMKDDQL VFKGILERYR QHFRKRPTT
|
|---|
| |