Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_50313 |
Symbol | TAL |
ID | 7198974 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011696 |
Strand | - |
Start bp | 268081 |
End bp | 269552 |
Gene Length | 1472 bp |
Protein Length | 399 aa |
Translation table | |
GC content | 51% |
IMG OID | |
Product | plastidic transaldolase |
Protein accession | XP_002185245 |
Protein GI | 219130171 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.328833 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | AATCAACACA CTTTGACTAT GAGTTAGACT GTCCATCGCC GAGTCCAGCA AATTGCAAAG GTCGTAAAGG TACCATCTCT TCTTCGGTTC CAGTTCATCC ACTTCTTGTT GTTCTGGCAT TTTCCTCGGA TTTTTGCTTT TTCGCTTTGG TGAGGTACCC GAAAGCGAGA TCATGAAGTC TTTGGTACCT TTGGCATTTG TCTTGGCCAC ATCGTCAGGT TTTGCTCCTC GAGAGCATCA TTATTATCGC CCTAACCAGC CGGCCAGGAC CAACGCTTTG GTACTTCAGG CTGAATCTAC TGCCGCCGTG CTAGCATCGG CCGACTCTCA ACTCGCACAA TTGGCGTCCA TGACGACACT GTCTATTGAC ATTGGCGACC TCCAAGTGAT TCAACTGTAC GCCAGTACTG GATACATTAC CGATGCTACC ACCAATCCAC TGTTCGTGTC ACAGGCGGGG CTCAGCGGTG ACCCACTATA CGCTAACATG GTAGACGACG CCGTCTCCTA CGCCTTGCAG CACACCAAAA ATAGCCCCTT GCACGACGAC CCTTCGGAAT CCGCAACGGT ATCCCTCGCG ATTGATCGGC TCGCGGTCAA TCTCGGCAAG GCTATTGCAG ACATCGTACC AGGATACATT TCTACCGAAG TCGATCCGCG CTTGTCGTTC GACACCGAGG CATCTATTCA ACGCGGTCTC CGCATTATCG ACATGTACGA AACTCTAGGG GTGCCGAAAT CACGAGTTCT GATCAAACTA GCCGCTACGT GGGAGGGAAT TTTGGCCGCC GAACAGCTAC AAGCCCGGGG GATACAGTGT AACTTGACAC TCGTCTTTTC TCTCACGCAA GCGATTGCGT GTGCGCAATA CGGTGCCCAC TTGATTTCGC CCTTTCCCGG ACGGTACGTC AGTAACGCAA CACGACGAAT CTACCTCACC CACTTCCCCA AAAATCTCAC CCTAACAACA AAAACCATGC AGAATCCTCG ATTGGTACAA AACGAAAGAG GGCCGGACGC AAGGTGTCGA GCCCGAGCAG GACGAAGGTG TCGTCGCTTG TCGTAACATG TTCGCTTACT TTAAAACACA CGGACACTCG ACGATTTGTA TGCCGGCAAG TTGGCGACCT TCTCGTGGAG CGGGATACGA TCTAGACGAG ATTTTGGCGT TGGCGGGAAC GGACCGCATG ACCATTCCGG CGCCACTGCT GGAGCAATTA GCCTCACGTA CCGACACTGT CGAACGGCAA CTGGACGCCG GACGGGTTGA AAAAATGGAT GAACTTGGCA ATGGAAAGAT GAGCGAAAAA GAATTCCGTT ATCGATTAAA CATGGATGGC TGCGGTACAG ATAAGCTAGC TGAAGGAATT CGTGCTTTTA TTGGAGAGAC GGAAAAGCTA GAAAAAGCTA TTGCCGAGAA GATTCGCACA GCTGTATCAG TGGCAAAGTA AATGCGCTGA TTTGAGGACC AT
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Protein sequence | MKSLVPLAFV LATSSGFAPR EHHYYRPNQP ARTNALVLQA ESTAAVLASA DSQLAQLASM TTLSIDIGDL QVIQLYASTG YITDATTNPL FVSQAGLSGD PLYANMVDDA VSYALQHTKN SPLHDDPSES ATVSLAIDRL AVNLGKAIAD IVPGYISTEV DPRLSFDTEA SIQRGLRIID MYETLGVPKS RVLIKLAATW EGILAAEQLQ ARGIQCNLTL VFSLTQAIAC AQYGAHLISP FPGRILDWYK TKEGRTQGVE PEQDEGVVAC RNMFAYFKTH GHSTICMPAS WRPSRGAGYD LDEILALAGT DRMTIPAPLL EQLASRTDTV ERQLDAGRVE KMDELGNGKM SEKEFRYRLN MDGCGTDKLA EGIRAFIGET EKLEKAIAEK IRTAVSVAK
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