Gene PHATRDRAFT_50313 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_50313 
SymbolTAL 
ID7198974 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011696 
Strand
Start bp268081 
End bp269552 
Gene Length1472 bp 
Protein Length399 aa 
Translation table 
GC content51% 
IMG OID 
Productplastidic transaldolase 
Protein accessionXP_002185245 
Protein GI219130171 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.328833 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
AATCAACACA CTTTGACTAT GAGTTAGACT GTCCATCGCC GAGTCCAGCA AATTGCAAAG 
GTCGTAAAGG TACCATCTCT TCTTCGGTTC CAGTTCATCC ACTTCTTGTT GTTCTGGCAT
TTTCCTCGGA TTTTTGCTTT TTCGCTTTGG TGAGGTACCC GAAAGCGAGA TCATGAAGTC
TTTGGTACCT TTGGCATTTG TCTTGGCCAC ATCGTCAGGT TTTGCTCCTC GAGAGCATCA
TTATTATCGC CCTAACCAGC CGGCCAGGAC CAACGCTTTG GTACTTCAGG CTGAATCTAC
TGCCGCCGTG CTAGCATCGG CCGACTCTCA ACTCGCACAA TTGGCGTCCA TGACGACACT
GTCTATTGAC ATTGGCGACC TCCAAGTGAT TCAACTGTAC GCCAGTACTG GATACATTAC
CGATGCTACC ACCAATCCAC TGTTCGTGTC ACAGGCGGGG CTCAGCGGTG ACCCACTATA
CGCTAACATG GTAGACGACG CCGTCTCCTA CGCCTTGCAG CACACCAAAA ATAGCCCCTT
GCACGACGAC CCTTCGGAAT CCGCAACGGT ATCCCTCGCG ATTGATCGGC TCGCGGTCAA
TCTCGGCAAG GCTATTGCAG ACATCGTACC AGGATACATT TCTACCGAAG TCGATCCGCG
CTTGTCGTTC GACACCGAGG CATCTATTCA ACGCGGTCTC CGCATTATCG ACATGTACGA
AACTCTAGGG GTGCCGAAAT CACGAGTTCT GATCAAACTA GCCGCTACGT GGGAGGGAAT
TTTGGCCGCC GAACAGCTAC AAGCCCGGGG GATACAGTGT AACTTGACAC TCGTCTTTTC
TCTCACGCAA GCGATTGCGT GTGCGCAATA CGGTGCCCAC TTGATTTCGC CCTTTCCCGG
ACGGTACGTC AGTAACGCAA CACGACGAAT CTACCTCACC CACTTCCCCA AAAATCTCAC
CCTAACAACA AAAACCATGC AGAATCCTCG ATTGGTACAA AACGAAAGAG GGCCGGACGC
AAGGTGTCGA GCCCGAGCAG GACGAAGGTG TCGTCGCTTG TCGTAACATG TTCGCTTACT
TTAAAACACA CGGACACTCG ACGATTTGTA TGCCGGCAAG TTGGCGACCT TCTCGTGGAG
CGGGATACGA TCTAGACGAG ATTTTGGCGT TGGCGGGAAC GGACCGCATG ACCATTCCGG
CGCCACTGCT GGAGCAATTA GCCTCACGTA CCGACACTGT CGAACGGCAA CTGGACGCCG
GACGGGTTGA AAAAATGGAT GAACTTGGCA ATGGAAAGAT GAGCGAAAAA GAATTCCGTT
ATCGATTAAA CATGGATGGC TGCGGTACAG ATAAGCTAGC TGAAGGAATT CGTGCTTTTA
TTGGAGAGAC GGAAAAGCTA GAAAAAGCTA TTGCCGAGAA GATTCGCACA GCTGTATCAG
TGGCAAAGTA AATGCGCTGA TTTGAGGACC AT
 
Protein sequence
MKSLVPLAFV LATSSGFAPR EHHYYRPNQP ARTNALVLQA ESTAAVLASA DSQLAQLASM 
TTLSIDIGDL QVIQLYASTG YITDATTNPL FVSQAGLSGD PLYANMVDDA VSYALQHTKN
SPLHDDPSES ATVSLAIDRL AVNLGKAIAD IVPGYISTEV DPRLSFDTEA SIQRGLRIID
MYETLGVPKS RVLIKLAATW EGILAAEQLQ ARGIQCNLTL VFSLTQAIAC AQYGAHLISP
FPGRILDWYK TKEGRTQGVE PEQDEGVVAC RNMFAYFKTH GHSTICMPAS WRPSRGAGYD
LDEILALAGT DRMTIPAPLL EQLASRTDTV ERQLDAGRVE KMDELGNGKM SEKEFRYRLN
MDGCGTDKLA EGIRAFIGET EKLEKAIAEK IRTAVSVAK