| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_56509 |
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| Symbol | |
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| ID | 7198867 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011695 |
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| Strand | - |
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| Start bp | 280676 |
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| End bp | 283074 |
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| Gene Length | 2399 bp |
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| Protein Length | 669 aa |
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| Translation table | |
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| GC content | 49% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002185080 |
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| Protein GI | 219129825 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.917921 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCCTTCT CAGTGTTGGC TCTTGTGCCA CGAAAACCAG ATTTCAAAGG ATAGTGCTGC
TGAAAACACA AAACCTCTTG GGATTAGCTT CCTAGCTCCC TGTGATAGCC ATCAGCTTGA
TTTCTGCCGC TACTAATATC CGCCACGAAA AACTGATCAA ATTTGGATTC CGTCGCACGA
AAAAGTTTTT TTCTGTATTC GATCTTCCAG AGCCGTCCAA ACGACCTCGC CGATACTTGT
GGAGCAATTT GGTGCTGACC CCTAAAACAG GTCCCAAGCC TGTACTGCTC TCGCACGAGA
TGGGGCAATT GTTCGCTCAA CGTAGTTTGA TACGGCTATG GCGTTTCCTG GTGTGCTTTA
TTTTGAATGT GCTATTTTTT CCCCCATTGG CAGCTTCCAA CTGGATAGAC CCAGATACGC
CCTTGGAAGC ACGAACGACG CAACCACTCG ACGTAAAAAT CCCTTATACA CCCAAACCAC
CAAAAAAACC TTCCCCTGCA ACTCGGCGGA AAAAGACGGT GTCTCCTGCG CCTACATCGA
CGCCATCTCC TTCGCTTTCT CCTACGCCCG CTCCGACGGA ATTCCCAACC TTTACGCCAC
GGACCTTTGA ACTAGTCTTT TCGGACGAGT TCAATACCGC GCATCGCACC TTCGAAGATG
GTTCCGATCC TCGATGGACT GCAATGAACA AAAACGACTA TACAAACGAC GCCTTACACT
ACTACAGTCC TGACAATGTC CGCGTGAACG AAGAGGGCGA ACTAGTGATT CACACCGAAG
CCGCCGATAC AGATGTCGTT GGCTTTGACG ACGTAAATCG AAAAAGAACG CACGTCACTA
AACACTTTCG ATCCGCTATG CTTCAATCGT GGAATAAGTT CTGCTTTACA GGTGGTATCA
TTGAAGCCGA AGTCATTCTG CCAGGTCAAT CAAACGTTGG TGGTTTGTGG CCTGCCTTTT
GGCTACTGGG CAATCTGGCA CGACATACTT ATGTCGGCAG CTCTCAACAT ATTTGGCCTT
GGAGCTCAGT TAACTGTACA CAAAAGTCCG GCTATGCACA GGCTATTTCC GGCTGCGACC
GAGTGGCGCA TTACGGACTT GCAACTCAAC TCGGTCGCGG TGCTCCCGAA ATGGACATCT
TCGAAGTGCA GCCCGGAAAT TTACACGCAA ATCAGGGCAC CTTCTTGAAG ATGCCAGTGG
GACAACCGTT CATGAGTTCG TCATTTCAAG TGGCACCGGG CCGTGCGAGC AATCGTCCCG
GACCGGGTGA ATGGCCGGGG CCGGGTCAAT GGTATGAAGG ACTTATGGGT GGTCGGAATA
CGTCACTGAA CATCTTATTC TACGGAAATT ACAATTCATT TCTGAATGAT GTCAATCCAG
CTCGCCAGGA CTATTGGAGC GATGCGATAA GTTACAATCG ACAATTGAAT GCGGATCATT
TCCAAAAGCC GCACCGGTAT AGAATGGAGT GGGATGTGCC CACAGAGTCC AGTGATGGTT
ATCTGAATTG GTTTTTGGAC GACGAGCTTG TGTTGGCGAT AGACGGGACT GGTATCAAGA
AAGCGGGTTT AGGTTCCGAA ATCTCATCGG AGCCTAGCTA CATAATTCTG AATACGGCAG
TTTCGAAGCA ATGGGGATTT CCGGAGCAAT GCCCAGCTAC TTGTCCATGC GATGTATTCG
ATTGCCATTC AACCGAATGG TCTGAGCTGT GTGGGTTTTC AGAAGGATTT TGCGATATGC
TGCTCAAAAA CAAGGCACCA GAGTACAAGG TGAACTGGAT TCGAGTGTAT CAGGATCCAA
ATCGCCCCGA ACAAAAAGTG GGATGCTCAA CCCCTGAACG TCCTACGCGG CGGTGGATTG
ATGCACATGC GGACATGTAT AAGACGGAGG AAGACTCGCA GCCACTGAAG GGAATTGCAA
CGGGACTTGG CTCATGCAAT CCAATGGACG ACAGTGAGCG GCCGGAGGCT TGTGGTGGTT
CTCAGCGAGG GCGGTGTACA CAAGGACGTG TGTGCGAATG CGTGTCCGGG TGGACCGGTC
CTCACTGTTT GTCGCGAAGA GGTTTTGATT CTGTGTTGTA CGATCAACCA GACAAGATCA
AGGACGTCGG CTTTGTTCCT CCCAAAATTG CTCCACGTGT ACTCATCGTT GGTTTGGCTA
CCTTGACAGT TTGTGTACTA GCGGCGATGC AATGGAAACA ACGATTCGAT GGTTGGCAGC
CTATTCCAGA AATTGAATGG AAAAAGTACG AAGAAAGAAG GATTACGAAT GGACGATACC
GACTGTTCCA ACACAGTCGC AGCGCTTGAG AGGGAACCCT TTTGCGGAGA CGAATGCTTT
TTGAAAAACA AAACGTTGTT AATCCAAACA CGCTAGCTTA CATTTCTGAT ACATCGCTT
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| Protein sequence | MGQLFAQRSL IRLWRFLVCF ILNVLFFPPL AASNWIDPDT PLEARTTQPL DVKIPYTPKP
PKKPSPATRR KKTVSPAPTS TPSPSLSPTP APTEFPTFTP RTFELVFSDE FNTAHRTFED
GSDPRWTAMN KNDYTNDALH YYSPDNVRVN EEGELVIHTE AADTDVVGFD DVNRKRTHVT
KHFRSAMLQS WNKFCFTGGI IEAEVILPGQ SNVGGLWPAF WLLGNLARHT YVGSSQHIWP
WSSVNCTQKS GYAQAISGCD RVAHYGLATQ LGRGAPEMDI FEVQPGNLHA NQGTFLKMPV
GQPFMSSSFQ VAPGRASNRP GPGEWPGPGQ WYEGLMGGRN TSLNILFYGN YNSFLNDVNP
ARQDYWSDAI SYNRQLNADH FQKPHRYRME WDVPTESSDG YLNWFLDDEL VLAIDGTGIK
KAGLGSEISS EPSYIILNTA VSKQWGFPEQ CPATCPCDVF DCHSTEWSEL CGFSEGFCDM
LLKNKAPEYK VNWIRVYQDP NRPEQKVGCS TPERPTRRWI DAHADMYKTE EDSQPLKGIA
TGLGSCNPMD DSERPEACGG SQRGRCTQGR VCECVSGWTG PHCLSRRGFD SVLYDQPDKI
KDVGFVPPKI APRVLIVGLA TLTVCVLAAM QWKQRFDGWQ PIPEIEWKKY EERRITNGRY
RLFQHSRSA
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