Gene PHATRDRAFT_50012 details

Gene Information

• Locus tag: PHATRDRAFT_50012
• ID: 7198788
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011694
• Strand: -
• Start bp: 137357
• End bp: 139705
• Gene Length: 2349 bp
• Protein Length: 578 aa
• GC content: 50%
• Product: predicted protein
• Protein accession: XP_002184897
• Protein GI: 219129440

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.0346836
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTGTTTG ACGTTTCCGA GGGAGCGGCC TATGCCGGTA AGTCCTTCCG GTATGCTTGC 
TATGCCCCGA GATCTCGCTA GCTGTTTGGC TAAAAAGGAG AAAATGGTAG CGAGATCTTG 
AGCCGTCCAA CGCACGTCTG CAAGATGCCG GGGGTGTTTC TCCCTATTTT TCAACAGTAT 
ATTGATGTTA GTCTACTAAT AGGAGAGATG GATTAATTTT CTTTCTTGAT CGATGAAGAC 
TTACACTTTG TGCCGCACGA TTTCTCCAGT CCTATACTGC GTTTTGTGCT TCTTCACCCT 
TTTGGGTTTG GGTGCCGCGG GCTACTTGAA CAAACTACCC AGCGTGTTGA CGTCCTGTTG 
CATGCTGAAT CAGAATGAAA GCGTCGGCGA GACGGACTAC TTCTTGAGTG CCCGTAATTC 
GGCCGGTACG TCGGCGATTG CCCTGTCCTT CTTTGCTTCG GGTATGGGGG CCTGGATCTT 
GTACGGAACT ACCGAAATGG GTGCCACCCC CCAGCTTTCC TGGCTGGGTG TGATGGGCTA 
CTCTACCGCC AGTTCCTTTC CAGCCGTCGT TATCTGCTGG TTGGGACCCA TGGTGCGAGC 
ACGTTCCACC GAAGCCTTTT CGACGACGGA TTTTGGACTC CAACGTTACG GACGAGTGAT 
GCAAATCTCC ATTGCGGCCA TTTCCGTCTT TTACATGTTC ATCTTTATCG TGGCGGAACT 
CACGGCGATT TCCAACATTT TCGCCCTACT GACCGGCAAC AATTCCAAAA TCTACGGTAT 
TGGTATTACT ATTGCGATTG GTGTGTTTAC AATCATTTAC ACGACCCTCG CGGGATTGCC 
GGCATCGATT GTGACGGATA GGTTTCAGGG CGGAATTGTC GCCCTCCTCA TCATTATGTT 
GACCTTGGCC GTAACCATTT CGGATGAAAA CAGAATCACG CGCGATGAAT TCGCCTTGGC 
CAGTAACTTC ACCATCCAAG GACTCAAGGC TGCCGTCACC TTGGTCATCG CCATTCTCTG 
TGCTGAACTC TTCAATCAGG GTACCTGGCA GCGTGTCTGG GCCGCCGAAT CCATACCCGT 
CATGCGTCGT GGATTTGCCA TTGGTTCCGC CATGGTCTTT CTCATAATGA TGTTTTTTGG 
AGTCATGGGG ATGATTGCGT ACGCCAAAGA TCCGGAATCC TACGACAACT TTGAAAAGTT 
TGCCTTTCTG GCGTTCTTCG ATCTCTTGCT GCCCCTCGGG AACGGATGGC ACGTGCTTGT 
GCTTATCCTT GTCACGGCAT TGGCGGCCAG TTCCATTGAC AGCCTCCAGA ACGGTTTGAC 
CAGTGTTTTT GCGCACGATT TGCTCAAAGT TGGTTGGAAT CCTATCTGGG CCGCCCGTGC 
ATTGATGGTC GCCGTTAACG TTCCCGCCAT TTGGTTGGCC AGTAGAAAGT GGGACGTGAT 
TGCCCTTTTC TTGGTTGCCG ATTTGGTTTG CGCCACCTCG GTATTCCCCG TCTTTTTGGG 
ATTGCAGACT AAAGATTTCG GTATGTTCAA GGCCCCTACC GAGTTGGGCG CCTTTATGGG 
ATGCGTTTCG GGCATTGTGA CGGTCCTGGT CAATGGCGTT GTCAACGATG CCGAAGGTGG 
TATCTTTAAA TACTTTTGGT TGCGCAACAA TGCCATTTGC GCTCTCTGCG GTAGCGCAAC 
CATGATCAGT TTCATCATTA CACCGGCGGT CAGTTTCGTC ATGACGTATG TCTTTACGTA 
CGCTGATCTT TTGGTTCGCG GAGAGCGTGC TCGTCAGCCA TTGATCGCTC TCGCATTCGA 
CAAGGACAAC GAGACGGCGG AAAAGTTCGA GGAGGAGAGT GTTGGCATGG AATACAATGA 
AGAGAAAAGT ACCAGCGGGC AGGCTGTCGA AGAGGAAAGT ACCCACCACA ATGAGGTTGA 
GGGAAGCCCA TTCGAACCGA AGCACCGCTC GGATGAAGAC ATTGCGTAAA TATGCAACCT 
TCGTGTCTCG AGGAGGCACA TCAACAGTAA GAAAGAAATT ACTTGAAGTG AAAGAATCAA 
AAAAAGGACC ATGAGATTGG AAAGATATAT ATATGTATGA AAATATAAAC GTGACACCTG 
GTGGTCGCAT TTGTTTGCGG GAGCTGATGA CGCTGAGATA TTGCAAGTTT GACTTCAATT 
ACCGTTTGAA CCTGATCGGG GTAATGCCTG CGTGAGGGAA CATCAAATGA GAACAACTGT 
GTTACAATAA GGGGACGATG TGAATTGATG AGACAAGGGC GACATGGACG ATGTATCGGT 
TGAGATGGAT ATTGAGACCG AGTACCCACC GTGTAGCCAT AATTGTTGAG CTAGTTTACA 
TTGATTCCT 

 

Protein sequence

MVFDVSEGAA YAVLYCVLCF FTLLGLGAAG YLNKLPSVLT SCCMLNQNES VGETDYFLSA 
RNSAGTSAIA LSFFASGMGA WILYGTTEMG ATPQLSWLGV MGYSTASSFP AVVICWLGPM 
VRARSTEAFS TTDFGLQRYG RVMQISIAAI SVFYMFIFIV AELTAISNIF ALLTGNNSKI 
YGIGITIAIG VFTIIYTTLA GLPASIVTDR FQGGIVALLI IMLTLAVTIS DENRITRDEF 
ALASNFTIQG LKAAVTLVIA ILCAELFNQG TWQRVWAAES IPVMRRGFAI GSAMVFLIMM 
FFGVMGMIAY AKDPESYDNF EKFAFLAFFD LLLPLGNGWH VLVLILVTAL AASSIDSLQN 
GLTSVFAHDL LKVGWNPIWA ARALMVAVNV PAIWLASRKW DVIALFLVAD LVCATSVFPV 
FLGLQTKDFG MFKAPTELGA FMGCVSGIVT VLVNGVVNDA EGGIFKYFWL RNNAICALCG 
SATMISFIIT PAVSFVMTYV FTYADLLVRG ERARQPLIAL AFDKDNETAE KFEEESVGME 
YNEEKSTSGQ AVEEESTHHN EVEGSPFEPK HRSDEDIA