Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_49988 |
Symbol | |
ID | 7198772 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011694 |
Strand | - |
Start bp | 43966 |
End bp | 45504 |
Gene Length | 1539 bp |
Protein Length | 452 aa |
Translation table | |
GC content | 50% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002184881 |
Protein GI | 219129407 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGGAAAGA ACCAATTCGT TCGCGGTTAT CTGTCCTATG TGCCAATCGC TGTTTGTGCG CTGTACCTCG TTGCATCGCC TGCGAAACTG GTAGCGGCTC ACAGTCAATG GAAGGTGCAG AATAGGCATC GTCAAACGAA ACTGTATGAA TCAAGCAAAA GTCCTGCAGC CCGCAGCGTC ATAGCAGATC TACGCGGAGG TTCACAGCCA AGGCACTCCT CTGCGGATGT CCGAGAAATT AATTCTACTC TAGATTTCAC CAACCCTTCC CTGATAGAAG AGGGACCCCA TTTAAACGCG TTGGATTCAC AGTCAGAAGC AGATCGGTTA CGGAATCTGG ATTTGAATAC ATCGGCAGCT CTGCCAATTC CGGCATGGAG GGAGCATTTG CCTCCACCGC TGCGTCTAAA GAAAAATACA TTGCAACGAG TCCGGATAAA GAACGTTGAG ATCTTCTTGT TGGGCACGGC ACACGTTTCC AGCGATTCTA GCGAGGAAGT TAAACTTCTG CTCCGTCATG TGCATCCCGA CGCTATTTTC GTTGAGCTTT GTGAAGCTCG CATACCTCTT CTTGAAGGAA CTGCGAAGGA CGAACACGAA GAAGAAGCAT TGGCACACCA GAATCGCACG ATGCGTGAAA AGATACGGCA GGTACAGTCC ACACAGGGAG GCTCCCGTCT TCAAGCTCTT TCCACAGTTT TGTTGACTTC TGTCCAAGAA GACTATGCAT CCGAGTTGGG AGTAGAGCTG GGAGGCGAAT TTCGGGCCGC ATACCAATAC TGGCAAGCGC AACAATCCAT ACCGACTGGA ACAAGTTCTC AATCTTGTGC TTTGATTTTG GGCGATCGTC CTCTACAATT GACACTTGTA CGTGCCTGGG AGTCTCTCGG GTTTTGGCCC AAGGTAAAGG TTTTGCTAGG TCTGCTTTGG AGCTCATGGC AAAAGCCGAA AAAGGAGGAA ATCCAGGAGT GGCTACAGTC TGTGCTTCGG GACGAAACAG ATGTTCTCAC GGAAAGTCTG AAAGAACTGC GCCGTCATTT CCCTACCCTT TTCACAGTAA TTATTGCAGA ACGTGATGCA TGGCTAGCTG CCAAGCTTGT ACAAAGCTGT CGAGTATTAT CGGCCTCAGC AACAGCAGCT TCTCCTGTAT GCACGGTCGT GGCCATCGTT GGTGCTGGAC ATATCCCGGG AATTGTAGCC TGGCTGACCA CGCCTCCAGC CGATACGTCT ATCACGCCTG AAACAGTACT ACGCGACTTG GTCACCACAA AGCGTTGGGC TCACGATGAC GCTATCCAAT TGCAAGCTAT CCCGGCGTGG ATTTACGAAG TTTCTCACTT GCAGCCCAGT GCCTCGTAAA AAAACACGCC GGCGCGATGC GAAATGCTTG GATGATACCT TCAACTTCGG AAGGGCCTCC TTTGCCCTTT TGTCTAATCA ACTGATAAAC CTTTCTGACT ACCGCTTTTG ATCATTGCGA GGGAGATTGG ATTGGCTTTG CAAAGCTTAA TCTAGTGTCA AACTTTAAAA TATCATCTC
|
Protein sequence | MGKNQFVRGY LSYVPIAVCA LYLVASPAKL VAAHSQWKVQ NRHRQTKLYE SSKSPAARSV IADLRGGSQP RHSSADVREI NSTLDFTNPS LIEEGPHLNA LDSQSEADRL RNLDLNTSAA LPIPAWREHL PPPLRLKKNT LQRVRIKNVE IFLLGTAHVS SDSSEEVKLL LRHVHPDAIF VELCEARIPL LEGTAKDEHE EEALAHQNRT MREKIRQVQS TQGGSRLQAL STVLLTSVQE DYASELGVEL GGEFRAAYQY WQAQQSIPTG TSSQSCALIL GDRPLQLTLV RAWESLGFWP KVKVLLGLLW SSWQKPKKEE IQEWLQSVLR DETDVLTESL KELRRHFPTL FTVIIAERDA WLAAKLVQSC RVLSASATAA SPVCTVVAIV GAGHIPGIVA WLTTPPADTS ITPETVLRDL VTTKRWAHDD AIQLQAIPAW IYEVSHLQPS AS
|
| |