Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_55126 |
Symbol | |
ID | 7198556 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011693 |
Strand | - |
Start bp | 463079 |
End bp | 464795 |
Gene Length | 1717 bp |
Protein Length | 418 aa |
Translation table | |
GC content | 52% |
IMG OID | |
Product | PFP pyrophosphate dependent phosphofructokinase |
Protein accession | XP_002184807 |
Protein GI | 219129250 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TCCGAGCCTG ACAAGCATCT TCTCCATTCG TTGCTTCTTG GTTTGAGAGA CTGACACTTC CCATATTCAA ACGTATATCT ATCTATACAC GTACCGACAG TAAGACTACG ACAACCTCAA TCGACATCCA CTCCTTCCTC TTTCCACCAT GAGTCACCAA GCCAATGTAC TGAAAGGCAC GCACGTGAAC GTCGCCATGA TGACTTCCGG AGGCCTCGCG CCCTGCCTGT CGTCCAGTAT TGCGCAACTC GCGCGCTGCT GGGTCCAGTC CTACCGCGAA GGAACCATCT CCGGTCTTAC GCTCCGCATG TACCTTGGCG GGTACAAAGG AATGGTTACG GGAGATTCCA TCGTCATTCC CGAACATCAA TGGGATTCAC TCGACTCTCT GAATACGGTG GGAGGATCGC CCATTGGAAA TTCGCGCGTC AAGGTCAGTG TAAACGCCAA ACCCCACTCA CACAGTTGAT GCAAGTGCAC CGCTAGCGTC TGATTCGTAG AGACGTGACG TGAATGGCTC GAATCAGCTA AACTCACCGA TTTCTACCTT TCCGGTTTTT GTGCTTCCAC AGCTGACGAA CGTTGCCGAC TGCATTAAGA AGGGATACGT CCAACACGGC AGCACGCCCT TGGAAGTAGC TTCGCAGCAG CTCATCAAGG ACCAAGTCCA CGTCGTTCAT ACGATTGGCG GAGACGACAC CAACACACAA GCTGCTACCC TTTCCGACTA CCTGTTGGAA AAGCACAATG GCAAAGTCGC CGTCATCGGT ATGCCCAAGA CCATCGACAA CGATGTTTAT CCTATTGTCC AGACCTTCGG AGCCGACACA GCTGCCGTAC AGGGGGCACG ATTTTTCGAG AACGTTGTCA ATGAATGCAC TGCCAATCCT CGCATGCTTA TTCTCCACGA GTGTATGGGA CGCGATTCGG GATACCTTAC GGCCGCTACG GCACAGAAGT ACCGCGACAT TCTCAATGCC CAAGACTTGC CCGTCGGCTC GGACTTGCCC TTCCACCGCA AGTCTGCCCG CGATATTCAC GCCATTTGGA TTCCCGAACT CAAGCTAGAC TTGGTCGCCG AGTCGGCGCG TTTGAAGAAA GTCATGGACG AAGTCGGTTG CGTCAACATC TTTTTCGGCG AGGGCACGGG CGTGCAGGAA ATCGTCGCGG ACATGGAGGC CAACGGTGAA GCCGTGCCGC GCGATGCCTT TGGACACGTC ACGTTGGCTA AAATCAATCC CGGACAGTAC TTCTCCCAAC ACTTGGCGGA CAATATTGGT GCCGAAAAGA CCATTGTGCA AAAGTCGGGA TACTTTGCCC GTTCCGCCGC GGCCAACGAT TTCGATCGCC AACTCATCGG GGCCTGTGCC GAGGCTGGCG TCGCCGCCGC TATTGACGGA CATTCCGGAT GCATGGGACA GGATGAAGAC AAACCCAACA CGCCCATTCG AGCGATTGAA TTCAGTCGCA TCAAGGGTGG CAAACCCTTT GATATTTCTC AGGAATGGTT CCAACAAATG CTCAAGGAAA TTGGACAAGT GTAAAAAGGC GTGTATTCAT CTTGCCCCGC TCCTTGATTG GACATGGTGG TCAACTCGTT GAAAAATATC TTCTATATTC AGAGACTTTG CCGTGTAAAC AGTCGTTTCC GTACGTGATC CTTTCTTCCT TTAGCTTTAC TAAACGTCCG TAGGTAAAAA AAAGTTGTAG GTGCTGA
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Protein sequence | MSHQANVLKG THVNVAMMTS GGLAPCLSSS IAQLARCWVQ SYREGTISGL TLRMYLGGYK GMVTGDSIVI PEHQWDSLDS LNTVGGSPIG NSRVKLTNVA DCIKKGYVQH GSTPLEVASQ QLIKDQVHVV HTIGGDDTNT QAATLSDYLL EKHNGKVAVI GMPKTIDNDV YPIVQTFGAD TAAVQGARFF ENVVNECTAN PRMLILHECM GRDSGYLTAA TAQKYRDILN AQDLPVGSDL PFHRKSARDI HAIWIPELKL DLVAESARLK KVMDEVGCVN IFFGEGTGVQ EIVADMEANG EAVPRDAFGH VTLAKINPGQ YFSQHLADNI GAEKTIVQKS GYFARSAAAN DFDRQLIGAC AEAGVAAAID GHSGCMGQDE DKPNTPIRAI EFSRIKGGKP FDISQEWFQQ MLKEIGQV
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