Gene PHATRDRAFT_55126 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_55126 
Symbol 
ID7198556 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011693 
Strand
Start bp463079 
End bp464795 
Gene Length1717 bp 
Protein Length418 aa 
Translation table 
GC content52% 
IMG OID 
ProductPFP pyrophosphate dependent phosphofructokinase 
Protein accessionXP_002184807 
Protein GI219129250 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TCCGAGCCTG ACAAGCATCT TCTCCATTCG TTGCTTCTTG GTTTGAGAGA CTGACACTTC 
CCATATTCAA ACGTATATCT ATCTATACAC GTACCGACAG TAAGACTACG ACAACCTCAA
TCGACATCCA CTCCTTCCTC TTTCCACCAT GAGTCACCAA GCCAATGTAC TGAAAGGCAC
GCACGTGAAC GTCGCCATGA TGACTTCCGG AGGCCTCGCG CCCTGCCTGT CGTCCAGTAT
TGCGCAACTC GCGCGCTGCT GGGTCCAGTC CTACCGCGAA GGAACCATCT CCGGTCTTAC
GCTCCGCATG TACCTTGGCG GGTACAAAGG AATGGTTACG GGAGATTCCA TCGTCATTCC
CGAACATCAA TGGGATTCAC TCGACTCTCT GAATACGGTG GGAGGATCGC CCATTGGAAA
TTCGCGCGTC AAGGTCAGTG TAAACGCCAA ACCCCACTCA CACAGTTGAT GCAAGTGCAC
CGCTAGCGTC TGATTCGTAG AGACGTGACG TGAATGGCTC GAATCAGCTA AACTCACCGA
TTTCTACCTT TCCGGTTTTT GTGCTTCCAC AGCTGACGAA CGTTGCCGAC TGCATTAAGA
AGGGATACGT CCAACACGGC AGCACGCCCT TGGAAGTAGC TTCGCAGCAG CTCATCAAGG
ACCAAGTCCA CGTCGTTCAT ACGATTGGCG GAGACGACAC CAACACACAA GCTGCTACCC
TTTCCGACTA CCTGTTGGAA AAGCACAATG GCAAAGTCGC CGTCATCGGT ATGCCCAAGA
CCATCGACAA CGATGTTTAT CCTATTGTCC AGACCTTCGG AGCCGACACA GCTGCCGTAC
AGGGGGCACG ATTTTTCGAG AACGTTGTCA ATGAATGCAC TGCCAATCCT CGCATGCTTA
TTCTCCACGA GTGTATGGGA CGCGATTCGG GATACCTTAC GGCCGCTACG GCACAGAAGT
ACCGCGACAT TCTCAATGCC CAAGACTTGC CCGTCGGCTC GGACTTGCCC TTCCACCGCA
AGTCTGCCCG CGATATTCAC GCCATTTGGA TTCCCGAACT CAAGCTAGAC TTGGTCGCCG
AGTCGGCGCG TTTGAAGAAA GTCATGGACG AAGTCGGTTG CGTCAACATC TTTTTCGGCG
AGGGCACGGG CGTGCAGGAA ATCGTCGCGG ACATGGAGGC CAACGGTGAA GCCGTGCCGC
GCGATGCCTT TGGACACGTC ACGTTGGCTA AAATCAATCC CGGACAGTAC TTCTCCCAAC
ACTTGGCGGA CAATATTGGT GCCGAAAAGA CCATTGTGCA AAAGTCGGGA TACTTTGCCC
GTTCCGCCGC GGCCAACGAT TTCGATCGCC AACTCATCGG GGCCTGTGCC GAGGCTGGCG
TCGCCGCCGC TATTGACGGA CATTCCGGAT GCATGGGACA GGATGAAGAC AAACCCAACA
CGCCCATTCG AGCGATTGAA TTCAGTCGCA TCAAGGGTGG CAAACCCTTT GATATTTCTC
AGGAATGGTT CCAACAAATG CTCAAGGAAA TTGGACAAGT GTAAAAAGGC GTGTATTCAT
CTTGCCCCGC TCCTTGATTG GACATGGTGG TCAACTCGTT GAAAAATATC TTCTATATTC
AGAGACTTTG CCGTGTAAAC AGTCGTTTCC GTACGTGATC CTTTCTTCCT TTAGCTTTAC
TAAACGTCCG TAGGTAAAAA AAAGTTGTAG GTGCTGA
 
Protein sequence
MSHQANVLKG THVNVAMMTS GGLAPCLSSS IAQLARCWVQ SYREGTISGL TLRMYLGGYK 
GMVTGDSIVI PEHQWDSLDS LNTVGGSPIG NSRVKLTNVA DCIKKGYVQH GSTPLEVASQ
QLIKDQVHVV HTIGGDDTNT QAATLSDYLL EKHNGKVAVI GMPKTIDNDV YPIVQTFGAD
TAAVQGARFF ENVVNECTAN PRMLILHECM GRDSGYLTAA TAQKYRDILN AQDLPVGSDL
PFHRKSARDI HAIWIPELKL DLVAESARLK KVMDEVGCVN IFFGEGTGVQ EIVADMEANG
EAVPRDAFGH VTLAKINPGQ YFSQHLADNI GAEKTIVQKS GYFARSAAAN DFDRQLIGAC
AEAGVAAAID GHSGCMGQDE DKPNTPIRAI EFSRIKGGKP FDISQEWFQQ MLKEIGQV