Gene PHATRDRAFT_5512 details

Gene Information

• Locus tag: PHATRDRAFT_5512
• ID: 7198526
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011693
• Strand: -
• Start bp: 245154
• End bp: 245903
• Gene Length: 750 bp
• Protein Length: 250 aa
• GC content: 56%
• Product: predicted protein
• Protein accession: XP_002184757
• Protein GI: 219129146

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.050444
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GAGTCCACCA CGGCCTCCGC CGTAGTGGAC GTGGCTCGGA ATTTGCGCGA CGTGCAGGAT 
CAAATCGACC AGGCCTGTCG GACACACGCG ATCGAATCGA CCCGCATTCG ACTCGTGGCG 
GTCAGTAAAA CCAAACCCAT AGAGTTACTG CAACAAGCCT ACGATGCCGG GTGTCGTGTC 
TTTGGGGAAA ACTACGCGCA AGAGTTAGCC GACAAAGTAC CCCTGCTGAA CCAACACGAC 
GGTAACAACG ATACCGTCTC GTGGCACTTT ATTGGTGGCT TGCAAAGCAA CAAGTGCAAC 
ATGCTGTTGA AGCCCTTTCT GGAGCAAGCA CCCAACGGAC CCACCGTGGC GAATCTGACC 
ATTGAAACGG TCGCCACGGT CAAACTCGCC AACAAACTCA ACCACGCCGT GCCGGAACCG 
CAAACGCTCA AAATATTCGT ACAAGTCAAC ACGTCCGGAG AAGACAGTAA ATCCGGGATT 
GAGCCCGCCG AATGCGTTGC TCTGTGCCGG CACGTTGCGC AGGAATGCCC CCGTCTGCAG 
TTGCAAGGTC TCATGACGAT TGGAGCCGTC GGGGACTTAT CGTGCTTTGA TGTACTCGTC 
GACTTGCGTC GAAAGGTAGC CATCGCGTTG GAACGGGACA CGGACGATCT GGAGTTGAGT 
ATGGGCATGT CCGGGGATTT CGTTCAAGCC ATTGCGGCGG GCGCCACCAA CGTACGAGTC 
GGATCCACCA TCTTTGGAGC CCGGAACTAC 

 

Protein sequence

ESTTASAVVD VARNLRDVQD QIDQACRTHA IESTRIRLVA VSKTKPIELL QQAYDAGCRV 
FGENYAQELA DKVPLLNQHD GNNDTVSWHF IGGLQSNKCN MLLKPFLEQA PNGPTVANLT 
IETVATVKLA NKLNHAVPEP QTLKIFVQVN TSGEDSKSGI EPAECVALCR HVAQECPRLQ 
LQGLMTIGAV GDLSCFDVLV DLRRKVAIAL ERDTDDLELS MGMSGDFVQA IAAGATNVRV 
GSTIFGARNY