Gene PHATRDRAFT_51242 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_51242 
Symbol 
ID7198639 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011693 
Strand
Start bp384739 
End bp385920 
Gene Length1182 bp 
Protein Length342 aa 
Translation table 
GC content50% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002184793 
Protein GI219129221 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.215587 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ACGCATATCC TAACGTATCT TCCTCCCCAA GGCTCCCTTT TATCCTCTCC ACAACTAGAA 
TATTATGTCG AAGTTCACAG GTAGGTTGTA ACATGGTTCC GGAGTATCTC TGATCCGCTA
GCGTTGGAAA TCTGAACTCA GAGATTCAAT TTTGTTATTA TTTCTGTAGG ACTCCTCATG
GGCATGGGCA ATCCTTTGCT CGACATTTCC GCCAACGTCG GTCAGGACGT TCTTGACAAG
TACGAAGTCA AGCTGGATTC TGCAATTCTT GCAGAAGAAA AACACCAGCC TTTGTATCCT
GAACTTATTA AGAACTACGA CGTGCAGTAC ATCGCAGGCG GTGCCACCCA GAACTCGATC
CGCGTCGCAC AGTGGATGCT CAAAGATAAG AAAGGGCAAA CGGCATTTAT GGGCTGCGTT
GGCAACGACG AATACGGCGC ACAACTCGAA AAATGCGCTA GCGACGATGG AGTGTTGGTC
CACTACATGA AAGACGAAAC GACGCCCACC GGAACCTGTG CAGCCCTCAT CAAGGACGGG
GAACGCGCCT TGGTTGCCAA CTTGGCCGCC GCGAACAACT TTAAGGAAAC ACACTTGACA
ACCGAAAAGG CTCAGGAAAT CATTGACGCT GCCCAGTTTT ACTATTGCGC TGGTTTCTTC
TTGACCGTCT CCGTTGAATC CTTGGTCAAG GTCGCGGGAC AAGCCGTCGA AAAGGGCAAA
ACCTTTTGCC TGAATCTTTC GGCACCCTTT ATTGTTGACT TTTTCGGAGA TCAACTGGCC
GCCGCTTTGG AATTCGCCGA TTTTTTGTTC GGTAACGAGA GTGAGGCCGA AGCTTACGGC
AAAAAGAACG GCATGGGTGA AGACCTGAAG GAAATTGCGC TCAAGATTTG TGCACTCCCC
AAAAAGAGCT CCAAACCGCG CACCGTGATT TTCACACAGG GGAGCAAGTC CACAATTGTC
GCGTGCGACG GTAAAGTGGA AGAGTTTGCT GTCGAGGCGC TGGAGGCGGA CAAGTTGGTG
GATACAAATG GTGCTGGCGA TGCCTTTGTC GGAGGGTTCC TCTCTCAATT GATCCAAGGT
AAAGATATGG CAACTTGCGT CAACGCGGGA CACTGGGCAG CCCGGTACAT TATCCAAACG
TCAGGAACAA CATTGGGAGC AACCTGCGAT TATTCAGCTT AA
 
Protein sequence
MSKFTGLLMG MGNPLLDISA NVGQDVLDKY EVKLDSAILA EEKHQPLYPE LIKNYDVQYI 
AGGATQNSIR VAQWMLKDKK GQTAFMGCVG NDEYGAQLEK CASDDGVLVH YMKDETTPTG
TCAALIKDGE RALVANLAAA NNFKETHLTT EKAQEIIDAA QFYYCAGFFL TVSVESLVKV
AGQAVEKGKT FCLNLSAPFI VDFFGDQLAA ALEFADFLFG NESEAEAYGK KNGMGEDLKE
IALKICALPK KSSKPRTVIF TQGSKSTIVA CDGKVEEFAV EALEADKLVD TNGAGDAFVG
GFLSQLIQGK DMATCVNAGH WAARYIIQTS GTTLGATCDY SA