| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_49919 |
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| Symbol | |
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| ID | 7198619 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011693 |
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| Strand | - |
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| Start bp | 290700 |
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| End bp | 294011 |
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| Gene Length | 3312 bp |
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| Protein Length | 1040 aa |
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| Translation table | |
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| GC content | 46% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002184773 |
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| Protein GI | 219129179 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.099413 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTGTCCAA CTTGCATTAA AGAGGCTTTC AAGGATCCAC ACGGGGAAAA CTTCAGGTAC
TGTCCTATTT GCCGGGAAGC ATGCGCTGTT GATATGATCG AATCTGTATG CGGACCGGGT
GCAGTGAAGG AGATGGAACG ACAGTTGCGC AACAAAGTAG AAATAGAAGT CCAGAGAGGG
ATGGACAAGA AGCAGGAGGA AAAGCTCAAA ATGAATGAAA GCAAGCAAGT GGCCTTGAAG
CTCTACCAGG ATCTCTGCGA ACGATTGAAT ATGAAATGTC CGCGATGTGA ATTGGTCTTT
GATGACTACA CAGGCTGTAA CGCACTTACA TGCCGAGGTC AGAGCTGCAG AGCCGCCTTT
TGTGCCATCT GCTTGAAGGA CTGTGACACG AATGCCCATC ACCATGTTCG TACCTGCCAC
GGGGACCTGT TTGACAAGAA GGCGTTCAAT ACGGCGAGAA AGAAGAGAGA AATCGACACC
ATCAACGATT TTTCGGCCGA AATCAGCGGA GAGCCACACG AGGTGAAAGA ATTGGTTCGA
ATCGAATTTG AAAAGTCCCA GTCAGACCAA ACACAATATT GTGAGGGAGG TTTCCCGTTT
GCTCCATTCC TATCTAGAGC AAAGAGAGAT CTTCTTGCGG CAGTCAACTC TGGACGACTT
TCAATTTTAA GCGACGCGGA AGCATATCCT GTCGAAACTG GTCTTACTCG ACGTGACATT
TCTCCGCGAA ATGTCATCCC CGAGAACTAT AGGCTTCGCC TACTACCATC CATGGAAAAT
ATTTATTCAA TTATTCTTGA AGAACAAGTG CACACCATCA ACGGTATTGC GTGGAAGAAG
ATAGCGTTGC AGGACGAAAA AGAAATACGC TCCAAAGACT TGGGCAGGCC AACAGTAGAC
GCTTTGAAAA ACATTGCGAT GGCATTGTCT TGCGGAGTTG TAGCCTTTGT AGGTACCAGC
TCTCTGTACC AAAGTTGTAT TTCACGAAAA GAAGGCAAGT ACGACCGAGA CGAGGCGAAG
GATCCTACCA TCTGTGTACA GTTCCACAAA ATTTGTCGAA ACGGTAACAT GAAAAAAAAC
GGGCAATCAC TATCGGAGCT GGGATTGGAG GAACGTGATG TAATAGGCGT CGACCAAAAT
GTCCGTATGC TTATATTAGC GGATCACGTC TTGAAATCTT CGGATGAGTC GATGAGCTTT
GAACCGCTCC AACACTTTGT TACAGGTCGG CAGCCGTCTC GAGTTTTTAC ATCTATTTCA
ATGCCACCAC CCCCCAGCTT CTTGACCTTG AACAACAAAC AGCAAAAGGT TGCGCACCCT
CTTTCTCTCC TCACTGCAAT GGAAGTTGCC GGTCCTCCAG GTACAGGCAA AACAAAAACC
ATCATGGAGC TTGTTAGGGG CATTCTTCAC TGCACAGACT ACGATGTCAT TCTCATGTCG
GAGAGGAACG GCGCCATTGA TGCTATTGCC GAAAAGATGG CTGGCGATTG TTTAACCTTA
AATCAATCTC AGTCGGTAAA GAGCGTTTCA AATGTGGAGC TCTGGTCCAA GGTCCTATCA
TTTGGTTCGG TTGGAGGCAT GGGCCCATTC TCCGCTTTAT TTACCTCCAC CGCCAAAGAA
TTGTATGCAA TATTTGTATA TTCTTGCTTA CGGAAGTGCT GGACTTGAAA CCTCTCACAA
AGATTTTGAC TCTTCACTAT TGACAGGTAC CACCCAGAGG TGCTGGAAGC CGACCGAGTC
TTGAAAAAGA AAATCAAGTT CATGGAAAAT TACTCGAGGC GGTTGAGAGA GGCACTCAGT
AGGTCGATAT ATGATCTCGA GGGAGAATTA TTTGAGGAGT CGAAGCTCAG CATGAGGGGT
CGACTTATTC AAAACAACAA GGAGAATAAT CTAGAGAACG CCCGTGATAT CATAAGCTCA
ACCATCAATG CTCTGGGTGC AGTGAAACAG TTCCGAGCCG ATAGCCCAGG CAAGCAGAAT
TCTGATCTTG TTATCCTTTC ATTGGAGCAC TCTGCTATCC TCCGAGATCT GATTCCCATC
AATTGTGAGA AAGCGGATCA CCACTCTGTT CCAAAGTCAA TCACTTCCAA CCCGAAAGCA
ATCAACCGGG CTCTGGAAGC CATAGAAAGA CGACTTCAAG AAGTCCTTCA GAACAAGTTA
TTTACTGTTG CGGCATGCGA AGCCATGGAC TACTCGATCC GCCTATCGCA AAGCTCGCTT
CAAGACGTTA GATTACGCAT CAAGATCGAT CTGCAAAAGG ACGCTCGCGT TTTTTTATCG
ACCATTGGTT CCTCGCACAA AATAAACAAG AGTGTTCTAG AAGCCCACAG AGTAGAACCA
GAGATAGTTT CCTTGGACGA AGATGCATTG AACGAAATGC AGCGAATGAA TGAACAGACA
AAGCCCACCA TTGTCATTTT TGATGAGGCT GGTTGCATTC CTTCGTATGA GCTACTAGGA
CTTTCTCGAT TGGGACGATC AATTAAATCT ATAATCTGCG TCGGGGACAA GCATCAGCTA
CCACCCTACA ACCCTGGATC AACGAAAAAC GACTTTAAAA AAGGAGGTTC ATTTGGCAAC
GTAAGGAGGG GAAAGCCAGT ACGGCAGCCA GAAAAAGTAC AAAGTTTACT GGATGCAAGT
GGCTTGCGAT CAGAAAAAGT CAAAGTTGAA CTCACGGAGC AATACCGCGT TCCTCGGGAT
ATTGCCGGTG TTTTGAACGC TCGTATCTAT CGTGGAAATT ACCAGACTTC TGTTCATTGC
AACGCTCCGA TAAAAGGTTT TCGTCTCGTG AACGTTCCAA AAAGTGGCCG CGACCAACCT
TACGTGAATC ATGACGAAAT TGACGCTTGT ATTCAGCTCG TGGAAAGCTC CCTGCAGGCA
GGGTTGAAAC ACACAATGGT GCTGACACCG GTAAGACGCA TGGGCTTTTC TTTCCCTGGA
CCACTACGCG CTATGCCTCA ACGGAACTAA CACTCGGTTT TTGTCCAAAC TTCCAGTACA
AAAAACAGCA GCGGGAAATG GAGTTCAGAT TTAAAAAGAA AGGGTGGAAT GACATTCTTT
CTGTACTGAC AATTGATCAG TGTCAAGGCC AACAGGCTGA TATTGTAATA CTCAGTCTGG
TCCGCAAACC AACGCGATTT CTTGACAAGA ATCGTCTCAA TGTGGCGCTG TCGCGGGCCT
GTCAAAAGAT GTACTTCCTT TGCGACAAAA ACCTATTTGT TGAAGCGAGC CAGAATCAAG
CCTGGGAGTG TCACCTTTTG GCGAAGGATC TGCTTGATCT AGCCGGTAAT TGAGGCAAAG
AAAACAAAGA CC
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| Protein sequence | MCPTCIKEAF KDPHGENFRY CPICREACAV DMIESVCGPG AVKEMERQLR NKVEIEVQRG
MDKKQEEKLK MNESKQVALK LYQDLCERLN MKCPRCELVF DDYTGCNALT CRGQSCRAAF
CAICLKDCDT NAHHHVRTCH GDLFDKKAFN TARKKREIDT INDFSAEISG EPHEVKELVR
IEFEKSQSDQ TQYCEGGFPF APFLSRAKRD LLAAVNSGRL SILSDAEAYP VETGLTRRDI
SPRNVIPENY RLRLLPSMEN IYSIILEEQV HTINGIAWKK IALQDEKEIR SKDLGRPTVD
ALKNIAMALS CGVVAFVGTS SLYQSCISRK EGKYDRDEAK DPTICVQFHK ICRNGNMKKN
GQSLSELGLE ERDVIGVDQN VRMLILADHV LKSSDESMSF EPLQHFVTGR QPSRVFTSIS
MPPPPSFLTL NNKQQKVAHP LSLLTAMEVA GPPGTGKTKT IMELVRGILH CTDYDVILMS
ERNGAIDAIA EKMAGDCLTL NQSQSVKSVS NVELWSKVLS FGSVGGMGPF SALFTSTAKE
LYHPEVLEAD RVLKKKIKFM ENYSRRLREA LSRSIYDLEG ELFEESKLSM RGRLIQNNKE
NNLENARDII SSTINALGAV KQFRADSPGK QNSDLVILSL EHSAILRDLI PINCEKADHH
SVPKSITSNP KAINRALEAI ERRLQEVLQN KLFTVAACEA MDYSIRLSQS SLQDVRLRIK
IDLQKDARVF LSTIGSSHKI NKSVLEAHRV EPEIVSLDED ALNEMQRMNE QTKPTIVIFD
EAGCIPSYEL LGLSRLGRSI KSIICVGDKH QLPPYNPGST KNDFKKGGSF GNVRRGKPVR
QPEKVQSLLD ASGLRSEKVK VELTEQYRVP RDIAGVLNAR IYRGNYQTSV HCNAPIKGFR
LVNVPKSGRD QPYVNHDEID ACIQLVESSL QAGLKHTMVL TPYKKQQREM EFRFKKKGWN
DILSVLTIDQ CQGQQADIVI LSLVRKPTRF LDKNRLNVAL SRACQKMYFL CDKNLFVEAS
QNQAWECHLL AKDLLDLAGN
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