Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_49854 |
Symbol | |
ID | 7198493 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011693 |
Strand | - |
Start bp | 96859 |
End bp | 97852 |
Gene Length | 994 bp |
Protein Length | 292 aa |
Translation table | |
GC content | 50% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002184732 |
Protein GI | 219129093 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.637212 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | AGAGGCCAGA GATCTTTACT TTGGTGTTGT TGAGGTAGTA ACAGTATAGT GTGCCGAAGT ATCATTGCAC AGACTACCAG TACGTACCGG CCTTCTGCAA AGCATTTACA GCACTATGGA CAATTTGGAA CTGCGCATGG CGCTCAACTC GGAAATTGCC GCCCAAGCCC TTACGGACGA CCTAAAGAAT CGGAATGCTC CGATGCAGTT AGAGAAGAAG AAACAGACGA TCGCCAATAC CACGCAAACC GAGTGGAACA TAGGCTCGTC CGTCGCGGAT AGCGGTAGTT CCGGTGGCGG TCGCTTTCGC GAGCACTGGC CGGAGCACTT GCCCCAACCT CCGTCACAGA GAAAACTCAA TGCAGAAGAA CTTTCGGCAG CGGAGTCGAG CAAGAATCCC AACATGCCCA AAGTTATTGT TTTTAATGCG AATACGCACG AAGGCTCTTC GATGGTGCGA GTCTTGTCGG AAAAGGGTTT GCACGTGGTG GCGATTGTAC GAATCGTCAC CTCCCGCAAC ACGAAGAATC TCATGAAACT ACGCAACGTG GAAATTAAGG TGGCTGATCT GAACAACAAG GATACCGTCA TGATGGCGGC CAAGGGCTGC TCTCAGGCAT TTTTGCTGAC GAAGTACTGG GAACGCTTCG AAAACCCCAT TGAGGAACAA ATGGCCCAAG TTGTGCTAGC GGCATCGGCT ACAGTTGGTA TCAAGCGTCT CGTGTTGGCA ACTTTCGAAG ACACTCATGA GCTGCGAACT CGGGGGCGTA AATCCCAACT TATGCCAACC CCCGAAGGAA AAATCTACCC AAACTTTGAA CCAATGAACT CGATCAACAC GGCAGCCAAA AAACTCGGAG TACAAGTTTC GCACATGTTC ACCTCGTTCT TGGACGAGCC GAATTCGAAG AAGTCGCTCA TTTTGATTAG AGGTGAAAAT GGTAAGATTC TCAGTCAGCC ATATATTCAA GATACACCGG GCAGTAAACA GTAA
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Protein sequence | MDNLELRMAL NSEIAAQALT DDLKNRNAPM QLEKKKQTIA NTTQTEWNIG SSVADSGSSG GGRFREHWPE HLPQPPSQRK LNAEELSAAE SSKNPNMPKV IVFNANTHEG SSMVRVLSEK GLHVVAIVRI VTSRNTKNLM KLRNVEIKVA DLNNKDTVMM AAKGCSQAFL LTKYWERFEN PIEEQMAQVV LAASATVGIK RLVLATFEDT HELRTRGRKS QLMPTPEGKI YPNFEPMNSI NTAAKKLGVQ VSHMFTSFLD EPNSKKSLIL IRGENGKILS QPYIQDTPGS KQ
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