Gene PHATRDRAFT_49854 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_49854 
Symbol 
ID7198493 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011693 
Strand
Start bp96859 
End bp97852 
Gene Length994 bp 
Protein Length292 aa 
Translation table 
GC content50% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002184732 
Protein GI219129093 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.637212 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
AGAGGCCAGA GATCTTTACT TTGGTGTTGT TGAGGTAGTA ACAGTATAGT GTGCCGAAGT 
ATCATTGCAC AGACTACCAG TACGTACCGG CCTTCTGCAA AGCATTTACA GCACTATGGA
CAATTTGGAA CTGCGCATGG CGCTCAACTC GGAAATTGCC GCCCAAGCCC TTACGGACGA
CCTAAAGAAT CGGAATGCTC CGATGCAGTT AGAGAAGAAG AAACAGACGA TCGCCAATAC
CACGCAAACC GAGTGGAACA TAGGCTCGTC CGTCGCGGAT AGCGGTAGTT CCGGTGGCGG
TCGCTTTCGC GAGCACTGGC CGGAGCACTT GCCCCAACCT CCGTCACAGA GAAAACTCAA
TGCAGAAGAA CTTTCGGCAG CGGAGTCGAG CAAGAATCCC AACATGCCCA AAGTTATTGT
TTTTAATGCG AATACGCACG AAGGCTCTTC GATGGTGCGA GTCTTGTCGG AAAAGGGTTT
GCACGTGGTG GCGATTGTAC GAATCGTCAC CTCCCGCAAC ACGAAGAATC TCATGAAACT
ACGCAACGTG GAAATTAAGG TGGCTGATCT GAACAACAAG GATACCGTCA TGATGGCGGC
CAAGGGCTGC TCTCAGGCAT TTTTGCTGAC GAAGTACTGG GAACGCTTCG AAAACCCCAT
TGAGGAACAA ATGGCCCAAG TTGTGCTAGC GGCATCGGCT ACAGTTGGTA TCAAGCGTCT
CGTGTTGGCA ACTTTCGAAG ACACTCATGA GCTGCGAACT CGGGGGCGTA AATCCCAACT
TATGCCAACC CCCGAAGGAA AAATCTACCC AAACTTTGAA CCAATGAACT CGATCAACAC
GGCAGCCAAA AAACTCGGAG TACAAGTTTC GCACATGTTC ACCTCGTTCT TGGACGAGCC
GAATTCGAAG AAGTCGCTCA TTTTGATTAG AGGTGAAAAT GGTAAGATTC TCAGTCAGCC
ATATATTCAA GATACACCGG GCAGTAAACA GTAA
 
Protein sequence
MDNLELRMAL NSEIAAQALT DDLKNRNAPM QLEKKKQTIA NTTQTEWNIG SSVADSGSSG 
GGRFREHWPE HLPQPPSQRK LNAEELSAAE SSKNPNMPKV IVFNANTHEG SSMVRVLSEK
GLHVVAIVRI VTSRNTKNLM KLRNVEIKVA DLNNKDTVMM AAKGCSQAFL LTKYWERFEN
PIEEQMAQVV LAASATVGIK RLVLATFEDT HELRTRGRKS QLMPTPEGKI YPNFEPMNSI
NTAAKKLGVQ VSHMFTSFLD EPNSKKSLIL IRGENGKILS QPYIQDTPGS KQ