| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_55091 |
|---|
| Symbol | |
|---|
| ID | 7198398 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011692 |
|---|
| Strand | - |
|---|
| Start bp | 35848 |
|---|
| End bp | 37420 |
|---|
| Gene Length | 1573 bp |
|---|
| Protein Length | 524 aa |
|---|
| Translation table | |
|---|
| GC content | 51% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002184557 |
|---|
| Protein GI | 219128726 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCAGCT CTTTCAGCAA GGGACGTTCT TTACGATTGG CGTGGCATCG ACGCGATTTG
CGATTAGCGG ACAATCCCTT GTATCATCCA AATGCAAACG ACTGCAACAA ACTTACAGTT
AACGATAGCC AGAATATTAT CAGTTTGTAT GTTTTCGACC AAGGCGATTT CAGTCTCACT
CCTTCCGTAA CGGGTGATCC GAATTGGACC GTCGCGCGGA CGGGCCCGCA CGCAGCACGT
TATTTGCGAC GGGCGGTAGT TGACTTGCGG AGGTCGCTGC GATCGATCGG TGGGGAACTG
CTCGTTCGGA TTGGAGATCC ACGCTTGATT GTCCCGCAAG TCGTCAAGGA ATTGAGGGAT
GTGACGGAGG TGACATGGAA CGAGGATCCC GGAGTGTACG AACGGAACAC ATCTGACAAC
GTGCGCAATG AACTCTTTTT CCAACAGCCC CTTGTACGGA TCACCACGGT TGCTTCCACT
CCACTGTATC ATCCCGACGA TTTACCGCGA TCGAAATACG ATTGGGATAG ACTAGCCCAT
CCCAAACAGA AACACACGAA AGCTTCACGA AAGCAAAATG GTGATTCTCT TTTTCAAAGT
ATTGAAGCGG CGCATACACT CGTTGATGTT TCGACTGCTC GATTCAAAGG AGTGCCACGG
ATTATGGGGG ATTTTCGGCG TGCTGCAATG GCCGCAGCCA TCTTGCGTCC GCCCTTGTCG
ACACCAAAGC ACTTGACGAG TCCCGTCGGC TTTATAGAAG CCGGAAACAT TCCTACCTTG
GCGGAGCTTC TCGATCCCTT GTTGCGGCGC AAACGAGACT GCATTTCCGT AATGGGTCTA
CCTAATGATT TTGTAGACTC CATTGTCGAG GCAGCGTTTG AAGCAGCTGC CGAAGACGAC
GAAATTGAAG ATGAAGATGC TGCAGATAGA GAAACCATGG AATACCAAAT TGCATCCGAC
CTTACCCGAT TTGTCCAAAA TGGACACGCC GCGACTGCCA AGAGAAGTCT CGCCGATGTT
TCCGATAACA ACAGCTCTCG ACTTTCCACC TTTTTGGCTC TGGGAATCAT TTCCCCTAGG
ACGGTTCATG CGATAACTGC GGAAGGTGGG GAAGGCGCTA GATGGTTGTG CAGTCACCTA
ACTATGCGGG ACTTTTTTAT ATACCTGTGC TTTGCTAGCG GATCCAGATT GTACCAACAA
GAAGGCCTTC CTGTCAACGC CAAACGGAAA AATATTCCCT GGTACAGCCC GGCTGCACCG
CAAAAGTACG ACTGCTGGAG ACGATGGGCG CAAGGGTTCA CTGGACTACC ATTGATCGAC
GCTGGTATGC GAGAACTGTG TCAAACGGGA TATTGCTCGA ATCGTGTCCG CCAAAACATC
GCCAGCGTAC TTTGTCGAGA TTTGCAGATC GACTGGCGAG CAGGTGCTGA AGTGCTGCAA
TTTTTGCTTC GCGACCATTG CGTCGCCGCC AATTGGGGTA ACTGGTTGTA CTTTTCCGGT
GTTGGACCAG ATCCAAAATC TCGTCATTTC CGTTCTGTTT CTCAGGCTTT ACGTTACGAT
CCTGAAGCGT TGT
|
|---|
| Protein sequence | MSSSFSKGRS LRLAWHRRDL RLADNPLYHP NANDCNKLTV NDSQNIISLY VFDQGDFSLT
PSVTGDPNWT VARTGPHAAR YLRRAVVDLR RSLRSIGGEL LVRIGDPRLI VPQVVKELRD
VTEVTWNEDP GVYERNTSDN VRNELFFQQP LVRITTVAST PLYHPDDLPR SKYDWDRLAH
PKQKHTKASR KQNGDSLFQS IEAAHTLVDV STARFKGVPR IMGDFRRAAM AAAILRPPLS
TPKHLTSPVG FIEAGNIPTL AELLDPLLRR KRDCISVMGL PNDFVDSIVE AAFEAAAEDD
EIEDEDAADR ETMEYQIASD LTRFVQNGHA ATAKRSLADV SDNNSSRLST FLALGIISPR
TVHAITAEGG EGARWLCSHL TMRDFFIYLC FASGSRLYQQ EGLPVNAKRK NIPWYSPAAP
QKYDCWRRWA QGFTGLPLID AGMRELCQTG YCSNRVRQNI ASVLCRDLQI DWRAGAEVLQ
FLLRDHCVAA NWGNWLYFSG VGPDPKSRHF RSVSQALRYD PEAL
|
|---|
| |