| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_49801 |
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| Symbol | hHrd1 |
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| ID | 7198372 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011692 |
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| Strand | - |
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| Start bp | 363488 |
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| End bp | 365386 |
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| Gene Length | 1899 bp |
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| Protein Length | 632 aa |
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| Translation table | |
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| GC content | 58% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002184604 |
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| Protein GI | 219128825 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGATCA TACCGATGGA CGACCATGGC AACGACGACG ACCACGACGA GCAACGACTC
CAGCGTGAGC GCGAACGCGC CGTGGAGCAA ATGCTCTGGG CACAGGAGCA AGCGGAACAA
CAAGACCAGA GACAATCGGC ACACGATCCG AATCCAACAC GTTTACCACC ACCCGACGAT
CCTGCCGTAC CCTTCCCTCC GCTCCCCGAC GAACAAGAAC CGCCCCTGCC TCCGCCATTG
TCCCACCAAA ATAAGTCCTG GTCCTACACG CAGTGGAGTT TCGCCGCCGC CGGAGCGACA
CTCTGGTACG CACTACGCAC CCGGGACGAA CAGTGGTATC TGGCCGTCGT CTATCTCCAT
TCCTCGCGGT GGGCGTGTGC CGTCCTCGGC AACGCGCTAC TCGCCGCGGC CGTCGCCACT
TTCCAACTCA CCGTCCGTCT GTTCCTACCC AACGGAGGCT TGCGCGTACA CGAAGCGGAA
GGTTTGCAAG ATTTCTTTCG TTGGAACGTG ACGGAAACGT GTCTCGCCTT GACCATGTTC
CGCTCCGAAC TGACCGTGCA GACGGCGGTG GAATTTGTGG TCCTCATTCT CTGCAAGTGT
CTACACCACG TGGCGAATAT GCGGGAACAG CACGTCCGTA TGACGCAGGA TGCCGTGGTC
CGGTGGCGTC CGGAACGGAT CGCACCACAA GCCTCCTGGC CACCACTCCC CGCCGTGCCG
ACAGCGCACT GGAGGATCCT GGTCTTTTTG GGAATCCTCC AACTTGGTGA TCTCTACGCA
CTCCAGTACT TTGGTCGGGA CATTGCCGAG AGAGGACCCT CCGTCAATAT ACTCTTCGCC
TTTGAAGCCG CCATTCTCCT GGTCTCGGCA TGGAGTCACC TGTTGCTCTG GCATATATAC
GTAGGGGACG GATTGCTCCA TTTTGGACAC GACCACTATC CGCGCAGTTT CGTGGCGCGA
TGGCTCCATA CCTGGAAAGA ATACAAGGCC ACCTTGACGT TTGCGGTCGA GTTGCAGGCA
CAAACCGTAC AGTTCCTCTT CTATTTGACC TTTTTCGCCA TTGTCATGAC GTACTACGGC
GTACCAATTA ATCTGTTCCG GGAAGTATAC GTTAGTTTTG CCGCACTCAA GGACCGGCTC
TGGGCGTTTC TGCGCTACCG CCAGCTCATG GCCAGCATGG ACCGCTTCGA CAGCGTCACG
GACGAGGAAC TCGAACAAGC CGGTCGGGAT TGCATTATTT GTCGAGACGA AATGAAAACG
CACGACTGCA AAGCCCTGCC CGTATGCCGC CACCTATTCC ACAAATCCTG TCTCCGCGAA
TGGCTCGTCC AACAACAAAC CTGTCCCACC TGTCGGAGTG ATATTGGTGC CAACGAGGTG
ACGCAAGAAC GACGCCGTGC GGCACAAGCC GCAGCGCAAG AACGACAGTC CGCCGACGAA
TCAACACCGT CGCCCGCCAC CACGTCACCA GATATTCTGT CACCCGCGGA TGCGAGCGGT
TCCGTGGAGC CAACGTCCGG GGCTGAATCC CCACCCACTC TCACCGAAGA AGACGGGCAC
GATTTCGAAA CCATGCTCCG ACACTATCAA ACCACGCTAC AAGCTCGGAT TCGACAACGA
TCGCGGCCGG CTCTTGTCCT GCCCGGACTG TACCAGGTCA CGCGATCAAG TGGTGCGTCC
GTTTACACCG GTGCACACGA CGATGCCACC CACCAAACGC CGACCGTGGT GAGAACCGTT
CCCCGTGGCG TCGTCGTGCT GGCTCTCGAG GGAGCAACGC TACGGTTCGT TGGTCCCGAA
CCCGTCGAGG CCGTACGTAT TCCAGATGGT TGGATGGCCC TGGCGGATGT AGAATTTCGG
CTCGCCATTG GTAAAGAAGC ACCACGCTCA GCAATTTAA
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| Protein sequence | MTIIPMDDHG NDDDHDEQRL QRERERAVEQ MLWAQEQAEQ QDQRQSAHDP NPTRLPPPDD
PAVPFPPLPD EQEPPLPPPL SHQNKSWSYT QWSFAAAGAT LWYALRTRDE QWYLAVVYLH
SSRWACAVLG NALLAAAVAT FQLTVRLFLP NGGLRVHEAE GLQDFFRWNV TETCLALTMF
RSELTVQTAV EFVVLILCKC LHHVANMREQ HVRMTQDAVV RWRPERIAPQ ASWPPLPAVP
TAHWRILVFL GILQLGDLYA LQYFGRDIAE RGPSVNILFA FEAAILLVSA WSHLLLWHIY
VGDGLLHFGH DHYPRSFVAR WLHTWKEYKA TLTFAVELQA QTVQFLFYLT FFAIVMTYYG
VPINLFREVY VSFAALKDRL WAFLRYRQLM ASMDRFDSVT DEELEQAGRD CIICRDEMKT
HDCKALPVCR HLFHKSCLRE WLVQQQTCPT CRSDIGANEV TQERRRAAQA AAQERQSADE
STPSPATTSP DILSPADASG SVEPTSGAES PPTLTEEDGH DFETMLRHYQ TTLQARIRQR
SRPALVLPGL YQVTRSSGAS VYTGAHDDAT HQTPTVVRTV PRGVVVLALE GATLRFVGPE
PVEAVRIPDG WMALADVEFR LAIGKEAPRS AI
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