Gene PHATRDRAFT_49782 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_49782 
Symbol 
ID7198454 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011692 
Strand
Start bp278403 
End bp279441 
Gene Length1039 bp 
Protein Length227 aa 
Translation table 
GC content50% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002184515 
Protein GI219128638 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ACGCAAACGC TGCTTGGCTC CATTCCGCTC TACTGGCTGT GTTTCGCTCC AGACGATCAC 
GGCAGGCTTT GAGGTTTCTT GTTGATCGAT CCATTGCAGC AGCACGCGTT ATCTCCCAGG
ATGAGTACTC AGAACGACCA GGGCGAAGAA TCTCCGGTCT TAGGTGTGGT CCTGGACGAA
GCTTCGAAAA AGCCAGAACT CACGGCCACC GTTGAGCAAA TTGCTCAAAT GCTGGCCGTG
ATCGAAAAGG ATGTACTACC GGTGACGGAG CAAGGTGTCG CAAAGGGGAA CAAAGTATTC
GGTGCGGCCG TCCTGGACGC CAACTTTGGC ACCGTCCTAG CCGGTACCAA TTCGGAGACT
ACCTGTCCCT TGTTTCACGG CGAAGTCAAA GTTATTTATG AATGGTCCAA AATTGTACCA
GCCTCGGAAC GCGGAGCAGC GGCACAATCA TCTGTCTTTT TGGCCACTCA CGAGCCCTGC
TGCATGTGCG TGTCCAGTAT TCTGTGGGCC GGCTTTCACA CCATCTACTA CTTTTTTCCC
TACTCCGTCA CCACTGCGCA AGGTATTCCG CACGACATTA ACACCATGCA CGAGTTGTGG
GGCGTTAACT CGTATCGCAA GCGCAACAAA TACTTCAGTT CGCGCTGTTT GATTGACTTG
ATTGAGGAAC TGGACGACAG TGTTCCCGAA AAGAAATCGC TGCAGGACAC GGTGCAGCGA
CTGGTGCAAG CGTACGATAC GCTTTCCAAC AAGTATCATT CGGAAAAGGC GAGTAATCCG
AACAATACCT TGGTCCTGGG TTAGTTCTAT CGGGCTTCCA TATTTTGTTA CGCATTACTG
TTTTGCTGGA GGTGGCGAGT GAATTTATTT TGAATTTGGC ACAGCTTTCC TTTTTGGTGG
CGTTTATTGC TGGCCATAAT ATGATACCAC TCTGAAGTAA CGGGCTTGAG ACTTGTCTGC
GAGTGGCTGG GTTTGATAGA ATAGCTAATC TTCATCTTGG TAAATGACTT TGTTGCCTCT
AGCTAGCAGG CAAACCCCG
 
Protein sequence
MSTQNDQGEE SPVLGVVLDE ASKKPELTAT VEQIAQMLAV IEKDVLPVTE QGVAKGNKVF 
GAAVLDANFG TVLAGTNSET TCPLFHGEVK VIYEWSKIVP ASERGAAAQS SVFLATHEPC
CMCVSSILWA GFHTIYYFFP YSVTTAQGIP HDINTMHELW GVNSYRKRNK YFSSRCLIDL
IEELDDSVPE KKSLQDTVQR LVQAYDTLSN KYHSEKASNP NNTLVLG