Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_30660 |
Symbol | |
ID | 7198389 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011692 |
Strand | - |
Start bp | 476096 |
End bp | 477442 |
Gene Length | 1347 bp |
Protein Length | 273 aa |
Translation table | |
GC content | 48% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002184623 |
Protein GI | 219128864 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.12339 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CATAAGTTTG TCGAAGACCA TATAGGTAAG TCCACCATGG CTTCTCTTGT ACAAGCGATC ATCCCTTCCA CAAGTCGTGT CTGAAAAGCC TGTGTATATC GTAACGCGCG GTGCACTTGT TTGAAGGACC TTTAGCCGGT GTTGTTCGCC AAAGAAAGTA TGTACCACGG TGCACGTTTG TACCTCTTAC CGGTTACTAA TTGCCATTGA CGTTCATATC GATCATGAGC CCCTTGGAAT TGCTTTGTTT CATGCAAAAC GAAAAATCAA ACTTTCTCAT AAATTTCATA TTTGATCAGT CATTCGCAGA CTTCGGTTAA ATTGTTGGAT TGCATAGCGA CTCTCCTTCG CCCGAAGTTT TAGTTTTTGA ACCCGAGAGC CACCATGCCC CTTTCCACTG AGCGTAAAGC TGAATACTTT GAGCGCTTGA AGTCGATGCT TACACAGTAC TCCAAAGCTT TTATCGTTGA AGTCGATAAT GTCGGTTCCA AGCAGCTCCA GATGACTCGT CGCGGCCTCC GCGGAAAGGC AGAAGTCCTC ATGGGAAAGA ACACCATGAT GCGCAAGTGC ATGAAAGAGT TCGTTGCCGA AAACCCGGGA ACTCCTGTGG AAAAATTGAT TGAGACGTGC CGCGGTAATG TCGGCTTTGT TTTCACCAAC GGAGATTTGG GTGAAATTCG CGAAGTTTTG GAGTCCAACA CTCGCCCCGC CCCGGCTCGT GTCGGTTCCG TCGCCCCGAT CAATGTCGTC GTGCCTAAAG GTCCCACTGG ATGTGACCCT GGCCAGACTG CCTTCTTCCA GACGCTTCAA ATTGCAACCA AAATTACCCG CGGTCAGATT GAGATGGTCA ATGACACTGC CCTCATTCAG GCTGGAGATC GTGTCACTGC TTCGCAGGCT GCTCTTCTTT TGAAGCTCGA TATTGAACCA TTTACCTATG GTTTGGTCCT CAAGAAGGTC TACGATAATG GATCGCTTTT TGATGCCAAA ATTCTCGAGA TCACGGATGA TGTGTTGGCG AGCAAGTTCG TGGGTGCCCT TAACATGATT GCCTCGCTCT CTTTGGCCAT GGGATTCCCT ACCCAGGCAA GTGTTCCGCA CAGTATCGCT AACGCCTACA AAGCAATTTT GGCTGTCACT ATCCAGCTTG AAAATTACAG CTTCGACAAA GCTGACCAAG TCAAGGAATA CCTAGCATCC GAGTAAATTT TCGGAGCTGC CAAGGTGGAA GAGAAGCAAA ATGAGCTGAA ACTAATGGAG GGGCTCGATT TATTAGATGC AGAAAACGGC ATTGGTGGCA ACATCTATGT TTCCTAACTG ATAAGTACAA ACCCTACTTC CATGTGG
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Protein sequence | MPLSTERKAE YFERLKSMLT QYSKAFIVEV DNVGSKQLQM TRRGLRGKAE VLMGKNTMMR KCMKEFVAEN PGTPVEKLIE TCRGNVGFVF TNGDLGEIRE VLESNTRPAP ARVGSVAPIN VVVPKGPTGC DPGQTAFFQT LQIATKITRG QIEMVNDTAL IQAGDRVTAS QAALLLKLDI EPFTYGLVLK KVYDNGSLFD AKILEITDDV LASKFVGALN MIASLSLAMG FPTQASVPHS IANAYKAILA VTIQLENYSF DKADQVKEYL ASE
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