Gene PHATRDRAFT_49486 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_49486 
Symbol 
ID7195834 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011690 
Strand
Start bp396542 
End bp398170 
Gene Length1629 bp 
Protein Length352 aa 
Translation table 
GC content49% 
IMG OID 
ProductD-glucono-1,5-lactone lactonohydrolase 
Protein accessionXP_002184125 
Protein GI219127819 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CAATTTTGCT ATTTACAGTA CGTTATTCAC TGTTCCCCCA CCGTCGCCAC CCAAGTTGGC 
AGACGACGGC TGGAATACCA ACACAGCACT GTAGTACCTC CCCCCATGAA ACAAGAAGAC
CTGGACTTGA CGAAGCTGTT GAGCGTTGCG TCGCTCGCGG TTGCTTCCGC CGAAGAAAAT
CTGGATTTCG TTCAGGCGCA TTTGGTCGTC GATTGTGGTT GCGAGTTGGG AGAAGGCGTA
ATTTTCGACG ACCAATCTCA CACAGTCTTG TGGACCGACA TTAATGGCAA ACGATATCAC
GAATTGCATT TGAATTATCT AGATCCCACC AAAGCTCAAT TTTCTACCTA CAACGTGCCC
AAGAAACTGT GTTCGTTCGG GATGGTGGCG GACTCGAGCC CACCGTCATC CGACACAGAC
ACGCGGGTGG GACGGAAGTT GCTGTGTGCC TGGGAAGATG GTTTTCAGCT CTACGATATC
CACAACGGCA AGGCTCTGTC CGAATACAGT ACTGGCGAAG ATGTGAATCC TGACAAGGGA
CCGACGCGCT TGAATGACGG CCGCGTGGAT CCATCTGGAA ATCGTTTTGT CTGTGGAGGC
TACTACGGGG AAATTGAGGG GCAGACAATG AAGGTCTTCA AGGTAGAACA GAAAAATGTA
AAGAAACTGT ACCACGAAGC GATTGTGGAC ACTATCGAGG TCACCAACAG CATCAATTGG
ACTTTGGATG GGAAAACCAT GTACTTGGCG AATTCTCCGA CACGCGCCAT CTGCACCTAC
ACATACCACA AAAATGGGAC CGTGACAGAC CGCAAGGAGT TTCACAAAAA GCCTGATGGG
GAAAAGGGCG TACCGGATGG GAGTTGCGTT GATTCGGAAG GATACCTCTG GAATGCTGTT
TGGAGAAGTG GACATGGGCC TGGGTAAGTG GCTAGAAAGT AAAAGCATCT CTGGCCGGCT
TTATTTCATC TTTTCGCTCA CGACATTCTT GTACGGGACT CTTTATAGCA TGGTGCAGCG
TATCAATCCT GATACTGGTC TTGTTGTATT TACGGTGCAC ATGCCGGATG CGACGTCGCA
AGTTACTTGT TGCTGCTTCG GAGGCGTCGA CATGGATATT TTGTTCATTA CGAGTGCGGC
GGAGCATCTC GATCTAGCTA AAGAGCCCCA CGCCGGAGGC CTTTACGCGG CGAAAGTCCC
TTACAAAGGT CGCAAGGAAT CGAGGTTTCG TTTGACGCCT GACGGTTAAA ACGTTGGCTC
CCTGGTGACC TCCTTATTTT TCCCAATTTC AAAGGGAGAT CCCTGTTAGT TCACTCAAAC
TAGCCAATTC GCATCTACAA TGTTTTGGGC GTCGCAATTT TCTAGAAGCA GAAAATGGTG
AGGTCGGTGC CCAGATCCGT ACATATCTAC CTTGTTGGAC GGATGCAACT TCCTGCAGAG
GGTTCCAACA CAAAAAAGTT CCTAGTGTAA GAGCAACACA CAAGTTCCAG TGTTCGCGAC
GTCTAACTGT GATTCTAACC GTAACAAAGT TAACAGTAAA GTCGCCTTCC CAGTCCTCTT
GGATTTTCAG CTGGGACACT CTCAGCAAAT CGATATCATC CTAACTGTAA AACCAAAAAT
TTCCGGTTG
 
Protein sequence
MKQEDLDLTK LLSVASLAVA SAEENLDFVQ AHLVVDCGCE LGEGVIFDDQ SHTVLWTDIN 
GKRYHELHLN YLDPTKAQFS TYNVPKKLCS FGMVADSSPP SSDTDTRVGR KLLCAWEDGF
QLYDIHNGKA LSEYSTGEDV NPDKGPTRLN DGRVDPSGNR FVCGGYYGEI EGQTMKVFKV
EQKNVKKLYH EAIVDTIEVT NSINWTLDGK TMYLANSPTR AICTYTYHKN GTVTDRKEFH
KKPDGEKGVP DGSCVDSEGY LWNAVWRSGH GPGMVQRINP DTGLVVFTVH MPDATSQVTC
CCFGGVDMDI LFITSAAEHL DLAKEPHAGG LYAAKVPYKG RKESRFRLTP DG