Gene PHATRDRAFT_49481 details

Gene Information

• Locus tag: PHATRDRAFT_49481
• ID: 7195947
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011690
• Strand: +
• Start bp: 379077
• End bp: 382767
• Gene Length: 3691 bp
• Protein Length: 1068 aa
• GC content: 54%
• Product: predicted protein
• Protein accession: XP_002184120
• Protein GI: 219127809

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CTAAAATCTG CCAGTGTAGA GTGCTCTCGT ATTTCACGAT ACCTACGGAC TGTGTGTGTG 
TGTGTGTGTG AGAGAGAGAG AGAGAAAGAG CCTCGGTACC AGTCTCTAGC ATTTCACAGT 
CTCACCCGTC AAACCAGTGG GAGATCGTTC GGTTGCGAGC GTCTTGATCT GCAACAGCCC 
TCGTTCGAAC GAAAGTACAG TACCCGCACA AGAATCTAGG TACTTTGCCT GCCTGCCTGT 
CTATCGACCT GCCAACCTGC CAACCTCCCT ACTCCAGCAT ACCTACCTAC CTACGCTAGC 
TAGCAAAGCA GTTCGGGAAA CAACAACCTA CAGTAAAGTA GACGGTGCGC GGAACATGTC 
GGGAAGAAGA GGTGCCACTG CCAATGGGGA AGGCAGTCGC TGGGAAACGT CGTACGAGAG 
CATCATGGGT AGCGCGATAG GCACCGCCAA CGCTGACACC ACCAACGCTA CTGCCATTCC 
AGGAAACACC GATGAAACTG CCGCTGCCGA GGCGGCCACC AAAGCGCTTT CTTCCCGACT 
CGTTACCTTT CGTCAATGGC TCACCGACGA AGCCCGGGTG GACGTCCACC CTGCATTGTG 
TATCGTCAAT GGGGAAGCCA CGGACGGGAC CCGAAACGCC CCCGTGCTGG TTTTTGAAAA 
GCATCCAACG GTAACGGCCC GACACAAGGG TCGCGTCGGG ACCGTGGATC AGGATGGGGA 
TCGGCTCTTG TGGGATCGCA CTATGGGATG TCAAGTACGA GCGGCCCGGG AAATCAAACC 
GGAAGAAGTA CTCATGACCA TGCCACGATC CGCCATGATT TCACCCGATT TGGTCGCCGC 
GAGTGATGCC GGAAAGGCGG TCTTGGCGTG CGTGTCACAC ACAACCGGCG CGGAAGGGTT 
CTGGGACGTG TTCGAAAACA CAACCTTGTG CGAAGCAACC TTTTCGCCCA AAGTGGCGGG 
GAATACGGGG CCACAGTTGC TAGTCAAGAT TTTGCAGGAA CGCAAAAAGG TGGAAGCCCT 
ATTTAACCAT CGGAAAAATA GTCCCGCTAC GGCTACCATC GGGGCGGCGT ACTCGTTAGC 
GGCGTCCAAA GGTGTGTCCA CGCGAGCGCC GGTATTGGCA TTTCTTATTC ATCAGCGATT 
TTCCAATACT AGTCGACCCG CGGTCTCATC CGACGTACAC GAATTGCAAA TGGCGCTGGA 
GAGTTCTGAC GGCAACGCCT TGCGGCCAGC AACTAGTGTG CGAGTCCCTT CCGGGGCCCC 
GAAGACCTTT GCTCCGTACG CACGGACCCT GCCATCCTCC GTGTCGATTC CGCTGTGCTG 
GAAACGCAAC GAGCTTGCAC TCTTGGCGGG ATGCATTCCG GGAGTATCCT TATTGCAAGA 
GGTCGCCACC AGCACGTTGC AGCTCGCGGC GGAGTTCGCC GCGTTGCTGG AGGCCGGCAT 
TCTGGAACGC TTCCCGGAAA CATTTCCACC GGGACTCTTG ACCTGGGAGC GTTGGATTTG 
GGCGGCGGCG TGCTCTTCTT CTCGGGTATT ACCGGCTACC AGTTATTTGA ACGAAGGCGA 
TACTAGCGCG TCCACGTTCG TACCGACAAC TGGCCAGGAG CTTCAATCAC CACCCGATAT 
TTGGAATGAG CTAGGAGTTA TGATTCCTTT ACTGGACATG CTAAATCACG AAACGGAAGC 
CCACCAGGTG ACCTGGAAAC CGTGCGTTCC GGAATCAAAC GTCAAAGTCG AAGACAGCCC 
GGGACCCGCG TCGCATCCAC CAGAGGCAAT CGTTCACAAG CGTGTTCGCA AAGGGTCGGA 
AGTATATTGC TGTTACGGCC TACTCAGTAA TCAAGATCTC ATACTCCGCT ACGGCTTTGC 
GCAAATGAAT AATCCCAGTG ACGAGATCAA AATTGGGTGG ACCTTGTCGG ATGCGGTCGG 
TCGGGTTAAA ACTCCGACAG ACTACACTCC ACTGCTGTCC GTTGACGACC AAGTGTACGA 
ATCCTCCGAC AGCGACGCGA TCAATACCTG GTGGACGCAA GAACGATTGA ATCTGCTCGA 
GAAGGAAGCG TTTCGGGGAT CAAAGGACAG TTTTGCGGCC TTGCAGGCTG GGAAAAAGCT 
ATCTTTTGTG GCCTACGGCG ACGGCACTTA CCACCCAATT TTGCTCACAA TGGCGGTTGT 
TGCCACCATG CCTCCACGAG ACGTGCGCGA GCATCTGCAG GAAGAAGACG AAAAAATCTC 
GCTATCGATA CGTCACCAAA GAATTCTACG CAATTACCTG GCCTTTACGT TTACGCGCAA 
GCTCGAAAAG CTTTTGAATG TTCTCGCTAA CGGATTACAC GCCCATTTCA ATAACGTCAA 
ATTATGGACA AAAGCTACGG ATGGAGGTCT GCGATATAAA AGCCCGGAGG ACACCAACGG 
AGACTATGTT GGCTGGCAAA CCTTTTTCGA CTCGCATGCG TACGGATCTT CGATGGAAGT 
GGAAAAGAAA TACTACGCTA TGGGATCGGA TAGCTGTGTA TTGACGTTAT ATGATGGGCA 
ACTTCGTGCG TTGCAAATAT CGATCGAAGG AGCCGTCGAC GAGGAAAAGT TTCAAGAATC 
GGTGCTAAAG CAAATTTGCG ATCTTGGTTT CGCGCTTGGC AAAGACGATG TGTCTGATAG 
TACAAAGGAA GAAGAGACTA ATGGGAAGAC CTCCAAGCGC AGTCGAAAGA ATCGCAAACG 
CGGATCCGTC AACAGTGTGA CGTCGCAAAA ACAGCCAGCT GTAAAGCTGC ACATAGGCAA 
CTTGGCTTAT TCGACAACCC CATCCGATTT GTACGACCAT TTTTCAACTC GGTACGGTAA 
AGATAACATT CTGGAGTGCC ACATCCCTAT TGAAAGGGAC ACAGGTCGGT CTCGTGGGTT 
TGGGTTTGTT ACTTTGCCTG AAAGTATTGC AAATGAAGCT CTCCAGTCGC GAGAGCAACA 
CGAAATCGAT GGACGTCTGG TGAAAGTTGC GAAGAGCAGC TCGGCAGGAT CGAACAATTC 
GGGCAAGTCT ATTACCCCTG CAAATGCCCA CTTGTCCACA GATCGTTGTG CGAAGTGTGG 
GTATCGCCCT AAGTATTGCG TCTGTCGAGA ACCTAGTCTT CCCGGTATTG ATCGACCACC 
AACCTCAATT GGAGGCGGTG GTCGTGGTCC TCCTACAAAC AATGGCCACG AGCCAGGTCA 
GTACGGAGGG GCCGATCGCT ATCGCGACGA CCGCTACCAT CGAGAACCTT CGCCGTACCG 
CCACGACCGA GGCTATCCTG ACCGTTATGG ACGAGGACGG CCCTACGATG AATTTCGAGA 
TCGTTCCCAC CATCGGATTG ATGACTACGA TCGCGATATC GACCGTCATA GAGGTAGTCG 
TCGACGGGAT CGGTCAGTAT CCCCTGGCAG TCGTAGCTCC GGACGACGCC GAGCATACGA 
GGAAGGACGA TCCCATCGTC GTGACGAAGA ATCCGATTGG GAGAGCGGAC GCAAGCGAAC 
TTGGAGTCGC GAGAGAAGCC GCGACCGCGA CCGTAGTAGG AGCCGTGATC GCAGCCGCCG 
AAAAAAAAGC AAGCGCCGAC GTAGCCGAAG CCGGAGCAGG TCATTCAGTC CCGGCGCAGT 
AGCAAAATGA TTATGCTTTC GAGGAAAAAC TTTTTCGCTA CACGGGATAA TATATAAAAA 
GGGAATGTAA GCTAGGCAGT GCGTTCGAGA C 

 

Protein sequence

MSGRRGATAN GEGSRWETSY ESIMGSAIGT ANADTTNATA IPGNTDETAA AEAATKALSS 
RLVTFRQWLT DEARVDVHPA LCIVNGEATD GTRNAPVLVF EKHPTVTARH KGRVGTVDQD 
GDRLLWDRTM GCQVRAAREI KPEEVLMTMP RSAMISPDLV AASDAGKAVL ACVSHTTGAE 
GFWDVFENTT LCEATFSPKV AGNTGPQLLV KILQERKKVE ALFNHRKNSP ATATIGAAYS 
LAASKGVSTR APVLAFLIHQ RFSNTSRPAV SSDVHELQMA LESSDGNALR PATSVRVPSG 
APKTFAPYAR TLPSSVSIPL CWKRNELALL AGCIPGVSLL QEVATSTLQL AAEFAALLEA 
GILERFPETF PPGLLTWERW IWAAACSSSR VLPATSYLNE GDTSASTFVP TTGQELQSPP 
DIWNELGVMI PLLDMLNHET EAHQVTWKPC VPESNVKVED SPGPASHPPE AIVHKRVRKG 
SEVYCCYGLL SNQDLILRYG FAQMNNPSDE IKIGWTLSDA VGRVKTPTDY TPLLSVDDQV 
YESSDSDAIN TWWTQERLNL LEKEAFRGSK DSFAALQAGK KLSFVAYGDG TYHPILLTMA 
VVATMPPRDV REHLQEEDEK ISLSIRHQRI LRNYLAFTFT RKLEKLLNVL ANGLHAHFNN 
VKLWTKATDG GLRYKSPEDT NGDYVGWQTF FDSHAYGSSM EVEKKYYAMG SDSCVLTLYD 
GQLRALQISI EGAVDEEKFQ ESVLKQICDL GFALGKDDVS DSTKEEETNG KTSKRSRKNR 
KRGSVNSVTS QKQPAVKLHI GNLAYSTTPS DLYDHFSTRY GKDNILECHI PIERDTGRSR 
GFGFVTLPES IANEALQSRE QHEIDGRLVK VAKSSSAGSN NSGKSITPAN AHLSTDRCAK 
FFPVLIDHQP QLEAVVVVLL QTMATSQVST EGPIAIATTA TIENLRRTAT TEAILTVMDE 
DGPTMNFEIV PTIGLMTTIA ISTVIEVVVD GIGQYPLAVV APDDAEHTRK DDPIVVTKNP 
IGRADASELG VAREAATATV VGAVIAAAEK KASADVAEAG AGHSVPAQ