Gene PHATRDRAFT_49437 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_49437 
Symbol 
ID7195802 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011690 
Strand
Start bp246284 
End bp247259 
Gene Length976 bp 
Protein Length308 aa 
Translation table 
GC content57% 
IMG OID 
Productnucleoside-diphosphate-sugar epimerases-like protein 
Protein accessionXP_002184095 
Protein GI219127756 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TCATTTTCTC TTTCGTACAG TATGAGGCTA TCATTGGCAG TCACACTGAT TTCCGTCCTT 
GGACTCGCCG CAGGATTCCT AGAAGTCGCG GCGTTCTCTC GCACGACACA ATTGGTACGG
TGCGAATCTC CCCGCTCTGT CGCGGATGCC GTTCGCAACA CGCGTCTCTG CGCCGCCTTA
CAATCCGGCG ACGGTGTCTT GGTAATTGGT GGCACCGGAG GAGTGGGGCA GCTCGTGACG
CAAAAGCTAG CCGCGGCGGC GTACGATGTC CGTGTAGCCT CGCGCGATCC CGCACGTGCC
GCTGCCGTTC TCGCGAACGA CAATGTCCGA GTCGTATCGC TGGACCTCTT GTCCGCGACG
CCGGCTGATT TAGATGCGGC TCTGCAAGGA ACGGCAGCCG TGGTTATTTC GGTTGGGACG
ACTGCTTTTC CAACCATGAA ATGGCGGGGC GGAAACACCC CACAAGCAAT TGATCAAGAA
GCCGTGACGA ATATTGCGCA ATCGGCACGA ACGGTTCCGG GGTTGAAAAA GGTCGTGCTC
TTGACCAGTG TGGGGGTAGA CCGAACGGGA GAAATGCCCT TTTTGATTCT GAATCTTTTT
GGTGTCCTGG ACGCCAAGAA AGCGGGTGAA CAAGCCGTCG TGGACGCTGC GGTACACAGT
GGGTTCGAGT ACGCCATTAT CCGGCCGGGT CGCCTCGTCG GAGGCCCGTA CACCAATCCC
GATGTGGCCA AGCTGCTACA GGTCCAAGGC GGCGCCGAAA ACGGCGTGGA TGTCCAGCCG
GGAGATTCAC TATTGGGAGA TTGCAAGCGT GACGCATGCG CGGAGGCCGT TGTCCAGTGT
TTGATCAACG AAGAATGTCG AAACGTAGAC TTCTCCATTG CTTCCAACGA TCAACCTGCT
CTCACCAACG AAGCATGGAA CCAAGCATTC CGGTCCATGA CCCGCTAAAG GCTATTGTAC
CTTAAAAATG AAGTAG
 
Protein sequence
MRLSLAVTLI SVLGLAAGFL EVAAFSRTTQ LVRCESPRSV ADAVRNTRLC AALQSGDGVL 
VIGGTGGVGQ LVTQKLAAAA YDVRVASRDP ARAAAVLAND NVRVVSLDLL SATPADLDAA
LQGTAAVVIS VGTTAFPTMK WRGGNTPQAI DQEAVTNIAQ SARTVPGLKK VVLLTSVGVD
RTGEMPFLIL NLFGVLDAKK AGEQAVVDAA VHSGFEYAII RPGRLVGGPY TNPDVAKLLQ
VQGGAENGVD VQPGDSLLGD CKRDACAEAV VQCLINEECR NVDFSIASND QPALTNEAWN
QAFRSMTR