Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_49437 |
Symbol | |
ID | 7195802 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011690 |
Strand | + |
Start bp | 246284 |
End bp | 247259 |
Gene Length | 976 bp |
Protein Length | 308 aa |
Translation table | |
GC content | 57% |
IMG OID | |
Product | nucleoside-diphosphate-sugar epimerases-like protein |
Protein accession | XP_002184095 |
Protein GI | 219127756 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TCATTTTCTC TTTCGTACAG TATGAGGCTA TCATTGGCAG TCACACTGAT TTCCGTCCTT GGACTCGCCG CAGGATTCCT AGAAGTCGCG GCGTTCTCTC GCACGACACA ATTGGTACGG TGCGAATCTC CCCGCTCTGT CGCGGATGCC GTTCGCAACA CGCGTCTCTG CGCCGCCTTA CAATCCGGCG ACGGTGTCTT GGTAATTGGT GGCACCGGAG GAGTGGGGCA GCTCGTGACG CAAAAGCTAG CCGCGGCGGC GTACGATGTC CGTGTAGCCT CGCGCGATCC CGCACGTGCC GCTGCCGTTC TCGCGAACGA CAATGTCCGA GTCGTATCGC TGGACCTCTT GTCCGCGACG CCGGCTGATT TAGATGCGGC TCTGCAAGGA ACGGCAGCCG TGGTTATTTC GGTTGGGACG ACTGCTTTTC CAACCATGAA ATGGCGGGGC GGAAACACCC CACAAGCAAT TGATCAAGAA GCCGTGACGA ATATTGCGCA ATCGGCACGA ACGGTTCCGG GGTTGAAAAA GGTCGTGCTC TTGACCAGTG TGGGGGTAGA CCGAACGGGA GAAATGCCCT TTTTGATTCT GAATCTTTTT GGTGTCCTGG ACGCCAAGAA AGCGGGTGAA CAAGCCGTCG TGGACGCTGC GGTACACAGT GGGTTCGAGT ACGCCATTAT CCGGCCGGGT CGCCTCGTCG GAGGCCCGTA CACCAATCCC GATGTGGCCA AGCTGCTACA GGTCCAAGGC GGCGCCGAAA ACGGCGTGGA TGTCCAGCCG GGAGATTCAC TATTGGGAGA TTGCAAGCGT GACGCATGCG CGGAGGCCGT TGTCCAGTGT TTGATCAACG AAGAATGTCG AAACGTAGAC TTCTCCATTG CTTCCAACGA TCAACCTGCT CTCACCAACG AAGCATGGAA CCAAGCATTC CGGTCCATGA CCCGCTAAAG GCTATTGTAC CTTAAAAATG AAGTAG
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Protein sequence | MRLSLAVTLI SVLGLAAGFL EVAAFSRTTQ LVRCESPRSV ADAVRNTRLC AALQSGDGVL VIGGTGGVGQ LVTQKLAAAA YDVRVASRDP ARAAAVLAND NVRVVSLDLL SATPADLDAA LQGTAAVVIS VGTTAFPTMK WRGGNTPQAI DQEAVTNIAQ SARTVPGLKK VVLLTSVGVD RTGEMPFLIL NLFGVLDAKK AGEQAVVDAA VHSGFEYAII RPGRLVGGPY TNPDVAKLLQ VQGGAENGVD VQPGDSLLGD CKRDACAEAV VQCLINEECR NVDFSIASND QPALTNEAWN QAFRSMTR
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