Gene PHATRDRAFT_49401 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_49401 
Symbol 
ID7195786 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011690 
Strand+ 
Start bp159710 
End bp160354 
Gene Length645 bp 
Protein Length140 aa 
Translation table 
GC content48% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002184071 
Protein GI219127706 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.476648 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTTGTGCACA TTTCTTTCTG TTTACGTACT TTCGTTCTCC CTTCCTAATT TACTTTGAAA 
TGATGTATAC TGCTCGGTCT TTCATTGGCA CCTTCCTAGC CTTGTGTTTG ATTGCCAAGG 
TTACCGCCTT TGGCGTTATT CCCCGTACGA ACAGCGCCGC TCCGTCCTCG ACAACTCGGC 
TCCACTTTTT TGGTGGTCTT TCGAACGCCT TCAAAAACGA CGACGGTTTG GGAAAGCCAC 
AGAATGCCGG TCTCAAAAAT GGGCCCAAAT ACAACGACAA CGTCACCGTC AACGGAAAGA 
AGGTTGAAGG CGCCGTTGCC GGGCAAAAGC TGACGGCGGT CGCCAACAAA GTCCGCGTTA 
AGATTCCCGT CAATTGCCAA AAAGGAGACT GCGGAACGTG TACGGTCAAA CTCAATGGAC 
GTCAAGTCAA AGGTAAGTGC TGGTAGTGTC ACGGCCTCCA TTTCACAAAT CTGGGATCGG 
ATCGTCCCAA CTAACTGTGA ACTTGTTTAT TTCCTTTGCT ACGAAACGAA TAGCATGTTC 
GACACCGCTG CCGACAGGAA AGGCAAAGAT TGAAACTTTG TAAATAACAC GCGTAGGACC 
ATATTCGCAC GGCTCTTTTG TTGATCGCGT AGTGTAAAGA TAGTC
 
Protein sequence
MMYTARSFIG TFLALCLIAK VTAFGVIPRT NSAAPSSTTR LHFFGGLSNA FKNDDGLGKP 
QNAGLKNGPK YNDNVTVNGK KVEGAVAGQK LTAVANKVRV KIPVNCQKGD CGTCTVKLNG 
RQVKACSTPL PTGKAKIETL