Gene PHATRDRAFT_30315 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_30315 
Symbol 
ID7195893 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011690 
Strand
Start bp140546 
End bp141382 
Gene Length837 bp 
Protein Length192 aa 
Translation table 
GC content49% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002184066 
Protein GI219127695 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GGAGTGTGAG CTTGCTTTTA GACTGTTTTC GATTCCGTGC CGCTGCAGGC CGTCTCTATG 
CGACGCACTC TTAGCCGCTT TCTAGCATAA AACAGTCGCA GGGGTACACA TTTCCTAATC
TAGGGAACGT CGTGATCGCC TGCATTCATA CGTCGTAATT TCTTACCTAA TTCGTCTCTT
TCTTCTCAGT TCAATCACAA TGGGTATTGA TCTAAAAGCC GGAGGTCGCC GCGTGGGGCA
CAGCTCCTCT ATGAAGGCCG TCAAAAGCCA AAACCCTTAC AACAAGCTAT TGATTAAGCT
TTATAAGTTC CTTGATCGCC GAACGGACTC AAAATTCTGT GGCACTGTGT TGAAGCGCCT
CCATATGAGC AAGGTGAACC AACCCCCGAT GGGTCTTCAC CGACTTTCCA AGTACATGGC
CCAAAAGGAA GGAAAGACGG CCGTGATTGT TGGAAAGGTA ACCGACGATG TGCGAATGTT
GGAATGCCCA AAGATGTCGG TCTGTGCACT AGCATTTACC GAGAACGCCC GAAAGCGCAT
TGTCGCTTCT GGAGGTGAAT GCATCACCCT GGATCAGCTG GCCCTTCGTG CCCCCAAAGG
ATCTAACACA GTCCTTCTTC GCGGACCTAA ATCGCGTGAG GCTTTGGCTC ATTTTGGACA
CTCTACGTCG GTCAATAATC CGCACACTCA CACCGGTGTC AAGCCGTACG TCCGAAGCAA
GGGTCGCAAG TTCGAGAAGG CTCGTGGTCG CCGTCGCTCT CGTGGTTTCA AGGTCTAAAT
TTCACTGTAA CATTTTAGAT CATTACTCTA TGAGGATAAA TCGCATTCTC TATTTTG
 
Protein sequence
MGIDLKAGGR RVGHSSSMKA VKSQNPYNKL LIKLYKFLDR RTDSKFCGTV LKRLHMSKVN 
QPPMGLHRLS KYMAQKEGKT AVIVGKVTDD VRMLECPKMS VCALAFTENA RKRIVASGGE
CITLDQLALR APKGSNTVLL RGPKSREALA HFGHSTSVNN PHTHTGVKPY VRSKGRKFEK
ARGRRRSRGF KV