| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_23260 |
|---|
| Symbol | |
|---|
| ID | 7195836 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011690 |
|---|
| Strand | + |
|---|
| Start bp | 406168 |
|---|
| End bp | 408127 |
|---|
| Gene Length | 1960 bp |
|---|
| Protein Length | 492 aa |
|---|
| Translation table | |
|---|
| GC content | 48% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002184129 |
|---|
| Protein GI | 219127827 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | AAAAAATTAG AAATACCACT ATCGTCACAT CTCCGCGTTG AAATCCCCAA ATCGAGGAAA
TCAAGTCGCG TTTTCTAGGA TCCATGTGAC CATAATGTCG ACGTATTGGA CCTGGCACAA
GCGTTCCCAT CCCATACTCC CCCCACCTTG TCCAGACTAA TGAAGGAGAG CATCATGGAA
ACACCGGTGG TGTTCCAATG GAGATATCGA GGTCGACATA CATATACTGC CTGTGCGCTT
GCCTAAACTC ATGTAATCTG GGATACGATA TCGGTATCGG CACGCAAGCA GGTAGACTGA
TACAAGATGA TCTAGGATTG ACGCGCGTAC AGCGAGAACT CTTCGTAGGA AGCATTGACT
TTTGGGCGAG TAAGTGGTGT GACGTTGTTT GCAGCCCGGC CCGCCCACCA GCAACGCGCA
AAACATACGT CTTCTGACTA GCCTTGAATT GTGTCAACAT CTCGTTCGTA AAAAACTGCA
GTGTTCGGCG CGCTCTCGGC TCAGTACGTC TCCGACACGT ATGGTCGTAG GAAGACCTTC
CTCGTGGCAG CAACAGGGTT CATTTTCGGT GTCGTGATCA CCGGAATTGC GCAGACTTAC
AGCGTACTTA TGCTCGGTCG CATGCTGGTA GGATTGGGGG TGGGAGTTGG TCTCGCGGTA
AGCATGGAAG CGTGATCCGT GTATCTGTCC CGACAGACAA TATACTCACT CGGAGTTGAC
CCTTCAGATA GATCCCCTAT ACATTGCAGA AATATCGCCT GCCAAGCATC GTGGAGAACT
CGTCACCTGG TCAGAAATCG CTTTGAATGT TGGGATTGTA CTAGGCTTCT CTATGAGCAT
CATCCTTGCC CCAATTGCCG ACGGTACTGA ATGGCGATGG ATGTTTTTCG CCGGAACTAT
CATGCCAATC GTCATGATTG CGTTGGTTCT GAAAGTCATG CCCGAATCGC CACGCTGGCT
AGTATCAAAA GGTCGGGAAA CGGAAGCTTT CGAAATTCTG CAAACGATCT ATCCAAAAGG
TGAGCGTGTT GATCTCATCA CTTTGTGGTT TTTAGCCAGC TTTGCTAAAC AACTTTACTC
GTCATGCGAA TTAATTGCCA AGGCTACGAT GTGGATCTGG TCGTACACGA CATGAAAGAA
GCATACGTTC GCGATAGGGC AGTCGAACAC GCGGCCGGCT GGCAGATTAT ATGGAACCCG
ACGCCAGCCT TTCGAAGGAT TCTCTTAGTG GGAATTGGGG TTGCTGTTGC CCAACAAGCC
GTGGGTATTG ATTCCATCCA GTACTATTTA CTGGATGTCC TTGAAAAAAG CGGAATTAAC
TCGGAGCAGA AGCAAAACTT GCTGCTTATT TTTCTTGGAA TGGTCAAGCT CCTGTTCATT
GTTGTTGGAG GGAAACTGTT TGATATAAAA GGTCGTCGCC CACTCCTTTT CATATCACTG
ATCGGGATGG CAATAGCATT GCTGATGATC AGCATAACAT TCTTCATCGC TTCAAGTACT
AGTTCAGGAT TCATCATTTT TGGACTTGGC ATGTATTTGG CGGCCTTTAG TGTTGGAATG
GGACCGGGGG CCTGGCTTGT TCCGGCGGAG GTCTTTCCAA CTTCAATACG GGCAAAAGCG
ATGTCACTGT CTGCTTTCCT CAACCGAGCA ACAGCGACAC TAATGGCCTC AACTTTTCTT
TCAACTGCAA ACGCTATCGG GTGGGGAGGG TTCTTCCTTT TGCTATCAAT CATTTCACTT
TTGGTTCTCG GTTTCTTGTG GATCTACCTC CCAGAAACCA AGGGGCGCTC ATTGGAGGAT
ATGTCGACGT ATTTTGCAGA GATTACGGGT GACAACTCAA TTCTTGAAGC TGAAGTGAGG
ATTTCCGAAG CACGTGATCC TGCCGTGGAG CTATCAATTC TTAAAAAATC ACAGAGAACA
ACCGATAGAG AAGTTATCTA AATTATGCAT CAAAACCTTC
|
|---|
| Protein sequence | MEISRSTYIY CLCACLNSCN LGYDIGIGTQ AGRLIQDDLG LTRVQRELFV GSIDFWAMFG
ALSAQYVSDT YGRRKTFLVA ATGFIFGVVI TGIAQTYSVL MLGRMLVGLG VGVGLAIDPL
YIAEISPAKH RGELVTWSEI ALNVGIVLGF SMSIILAPIA DGTEWRWMFF AGTIMPIVMI
ALVLKVMPES PRWLVSKGRE TEAFEILQTI YPKGYDVDLV VHDMKEAYVR DRAVEHAAGW
QIIWNPTPAF RRILLVGIGV AVAQQAVGID SIQYYLLDVL EKSGINSEQK QNLLLIFLGM
VKLLFIVVGG KLFDIKGRRP LLFISLIGMA IALLMISITF FIASSTSSGF IIFGLGMYLA
AFSVGMGPGA WLVPAEVFPT SIRAKAMSLS AFLNRATATL MASTFLSTAN AIGWGGFFLL
LSIISLLVLG FLWIYLPETK GRSLEDMSTY FAEITGDNSI LEAEVRISEA RDPAVELSIL
KKSQRTTDRE VI
|
|---|
| |