Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_15960 |
Symbol | |
ID | 7195930 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011690 |
Strand | - |
Start bp | 275898 |
End bp | 277013 |
Gene Length | 1116 bp |
Protein Length | 325 aa |
Translation table | |
GC content | 49% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002184218 |
Protein GI | 219128013 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.713821 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | AAACGCATCG ATGCCGTCCT TGCTGCTCTA GAACCAGAAA TGTCGCGGTC ATTTTGTGGA AACCTTGTTG CTAATAAACG CGTTTCCATT ATCCAAGAGA ATGGCGATAA TTGCCTCGTA GATCGCAAGT CATTCAAGGT TGAACCGGGA CAGCAGCTTA TTATTTCCTT ACCACGGGAG GAAGGGGCTT CCGAAATCAT TGCCCAGGAC CTACCTCTGG ACATAATTTT CGAAGACGAG CACATGATTG TTATTAACAA GGCTGCCAAC ATGGTGGTAC ACCCAGCTGC GGGGAACTGG GATGGAACAG TGGTAAACGC CCTTGCCTAC TATCTTGCCA ATAGGAGTCC ATTCGGTGCC GGCGCCTTTA TTGACAGGGA GGGAAAATCG GAGTCGAGTA GAGAGAATGT TGAACACGTG GAAGGAGCCG AAGGCGAGAG TATATCATTC CGACCCGGGA TAGTACACCG TCTTGACAAA GGAACGACAG GAGTATTGGT GGTCGCGAAA ACATCACAGA CACTTGCAAC CTTGTCAAAC TTTTTCGCAG CACGTCAAGT TAAGAAAACG TATATGGCAA TCACGGTCGG AAACCCTGGG AAGCATGTGG TGATTGATAA GCCCATTGGT CGGCATCCTC TTCACCGGCA ACGGATGAGG GTAGTCCCTG ACCCTCACCA AAAGAACAGC AGTGGAATGG CACCGAAAGA TCGTATGGTA GACAACCGGT CGGCCTCCCA AGCTGGACGA CGGGCTCTTT CCTATGTCGA TACGTTGGCG TTTGATGGGA AACTGAGTTT GGTCCAAGTA CGCATTGAGA CAGGGCGCAC GCATCAGATT CGTGTCCATC TTCAGGATCG CCACACTCCA ATTTACGGCG ACGATATTTA TGGACTAGCG GACTGGAACA AAAAACTTTC CAAAACACAT CGAATCGTTA GACCGTTATT GCATGCTTAC AAGCTAGAGA TCAATCACCC CGTCACCGGA GAACCAATGG TCTTCAAGGC ATCGCTGGCG GACGACATGA AGCGAATTAC CACGACTATC TATCCTGATT CCGAAAAGGA GATCCCTGAC CTATTCCACG GGAATACGAT ATCAAATGCC GCTTAG
|
Protein sequence | KRIDAVLAAL EPEMSRSFCG NLVANKRVSI IQENGDNCLV DRKSFKVEPG QQLIISLPRE EGASEIIAQD LPLDIIFEDE HMIVINKAAN MVVHPAAGNW DGTVVNALAY YLANRSESIS FRPGIVHRLD KGTTGVLVVA KTSQTLATLS NFFAARQVKK TYMAITVGNP GKHVVIDKPI GRHPLHRQRM RVVPDPHQKN STGRRALSYV DTLAFDGKLS LVQVRIETGR THQIRVHLQD RHTPIYGDDI YGLADWNKKL SKTHRIVRPL LHAYKLEINH PVTGEPMVFK ASLADDMKRI TTTIYPDSEK EIPDLFHGNT ISNAA
|
| |