Gene PHATRDRAFT_15960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_15960 
Symbol 
ID7195930 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011690 
Strand
Start bp275898 
End bp277013 
Gene Length1116 bp 
Protein Length325 aa 
Translation table 
GC content49% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002184218 
Protein GI219128013 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.713821 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
AAACGCATCG ATGCCGTCCT TGCTGCTCTA GAACCAGAAA TGTCGCGGTC ATTTTGTGGA 
AACCTTGTTG CTAATAAACG CGTTTCCATT ATCCAAGAGA ATGGCGATAA TTGCCTCGTA
GATCGCAAGT CATTCAAGGT TGAACCGGGA CAGCAGCTTA TTATTTCCTT ACCACGGGAG
GAAGGGGCTT CCGAAATCAT TGCCCAGGAC CTACCTCTGG ACATAATTTT CGAAGACGAG
CACATGATTG TTATTAACAA GGCTGCCAAC ATGGTGGTAC ACCCAGCTGC GGGGAACTGG
GATGGAACAG TGGTAAACGC CCTTGCCTAC TATCTTGCCA ATAGGAGTCC ATTCGGTGCC
GGCGCCTTTA TTGACAGGGA GGGAAAATCG GAGTCGAGTA GAGAGAATGT TGAACACGTG
GAAGGAGCCG AAGGCGAGAG TATATCATTC CGACCCGGGA TAGTACACCG TCTTGACAAA
GGAACGACAG GAGTATTGGT GGTCGCGAAA ACATCACAGA CACTTGCAAC CTTGTCAAAC
TTTTTCGCAG CACGTCAAGT TAAGAAAACG TATATGGCAA TCACGGTCGG AAACCCTGGG
AAGCATGTGG TGATTGATAA GCCCATTGGT CGGCATCCTC TTCACCGGCA ACGGATGAGG
GTAGTCCCTG ACCCTCACCA AAAGAACAGC AGTGGAATGG CACCGAAAGA TCGTATGGTA
GACAACCGGT CGGCCTCCCA AGCTGGACGA CGGGCTCTTT CCTATGTCGA TACGTTGGCG
TTTGATGGGA AACTGAGTTT GGTCCAAGTA CGCATTGAGA CAGGGCGCAC GCATCAGATT
CGTGTCCATC TTCAGGATCG CCACACTCCA ATTTACGGCG ACGATATTTA TGGACTAGCG
GACTGGAACA AAAAACTTTC CAAAACACAT CGAATCGTTA GACCGTTATT GCATGCTTAC
AAGCTAGAGA TCAATCACCC CGTCACCGGA GAACCAATGG TCTTCAAGGC ATCGCTGGCG
GACGACATGA AGCGAATTAC CACGACTATC TATCCTGATT CCGAAAAGGA GATCCCTGAC
CTATTCCACG GGAATACGAT ATCAAATGCC GCTTAG
 
Protein sequence
KRIDAVLAAL EPEMSRSFCG NLVANKRVSI IQENGDNCLV DRKSFKVEPG QQLIISLPRE 
EGASEIIAQD LPLDIIFEDE HMIVINKAAN MVVHPAAGNW DGTVVNALAY YLANRSESIS
FRPGIVHRLD KGTTGVLVVA KTSQTLATLS NFFAARQVKK TYMAITVGNP GKHVVIDKPI
GRHPLHRQRM RVVPDPHQKN STGRRALSYV DTLAFDGKLS LVQVRIETGR THQIRVHLQD
RHTPIYGDDI YGLADWNKKL SKTHRIVRPL LHAYKLEINH PVTGEPMVFK ASLADDMKRI
TTTIYPDSEK EIPDLFHGNT ISNAA