Gene PHATRDRAFT_49342 details

Gene Information

• Locus tag: PHATRDRAFT_49342
• ID: 7195502
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011689
• Strand: +
• Start bp: 635929
• End bp: 638340
• Gene Length: 2412 bp
• Protein Length: 295 aa
• GC content: 48%
• Product: predicted protein
• Protein accession: XP_002183907
• Protein GI: 219127364

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CGTTGAAAAG TGACTTGCTG AAAACACTAG TTGTTGCGCA AATTCCGACC ATGGTGCGCG 
TCTTTTATGA GCCCCCTCCT TTTGGTGTGG GAACAGATCT GAACAGGTCA GGATATGGTG 
TCCACGGTGG CGGTCTCTTC AAAGGCTTGT TGGAAAGGGC CAGCAAGATG CGCCCCATCG 
TTTCTATTGG AGTTCCGGTG ACGGTGATCT TCATGATCGC CTCCATTCCA CTCAGTACGT 
TTTGGTATTC CGGATTCCAT TAGCGTATCT TAACTTTTTG GAATCTCATC AACTGTAAAC 
TGTGCAATTT TGTTCGTTGC TACTGTCTAG TGTTCAACAA GCTCCCTTTC TCCATGGATC 
CGGAGTATCA GGCGGCTCAG CGCGCATATA TGCGTTACCA CAATATGAAT CCCATTTTCG 
GTATCAGCAG CAAGTAAGTG TGCTACGAAA TGTTGGATTT GTTCCATCCT GCTCTCCAAT 
TGTCAGACAC ACTGAAGCAA AATGAAGAAG GGATCAAGGG GATTGGAGGT TTCGACGTCT 
ACTGCCAGCT TGAAGCTTTG GGATGTATTT GTTGTCTTAC CGTATTCTCT TCTCCTGATA 
TTTTTAGACG CGCTCGGGCC ATGGACGCCG ATCCGTAATC GTGGTCTCCT ACACGTCGAC 
GATTGGGAAT GATGATTGTG AAGCATTCAC AAGTGCAGTC CCATCGGATG TATTGATCGT 
ATTGTTTAAT GAATCATTAA CAGTAAGTAG GAACGTTTAC ATGACATTTT AGATGTTATA 
ATGTGATGCC TACGAGAAAA GCCATAGACA GCGCACTTTT TGTCAGTTCA TACAGTTCGG 
TTCACAGTAA GCAGAGTTTC CCGTCCAATT TGACGGGATT GAACGTGCCC CACATGTTCG 
TCATTTTTGT TCCATCCTGT CTATAATTTC ATATCTTCTA AAGCTCTGCG GGGTTGTTAG 
AGACCCTAAA ATCTTTGGCT AGGTAGAAAA GATCACTGAC GACGTGCCAA CTGTTCCCGA 
TGCCGCTCAA ACTGCCTGGG CAGCTTTCAT CCGTCTTTTC GACGAGCTCC GGAAGATTTG 
CAGGGAATTC ATTGGTATTT TGCCAATGCT GTATGACTAC CATATGGACT TTCCCGAACC 
ACAATTCTCC GCTTTGTCTC CTTTGCATTC ACAGGCTCAT AAATTTGAAA CCAGTTCCCA 
AGTTATTTCA GCAACACATC CACAATTGTT CAGTTTTCTG AAACTCTGCT TCTTTTTCCT 
TACCTGCCAG CAAGGTGCTG CAACACTCCA GGGTGGTCCT ATGGTCGGGG AATCCGGAAA 
CCAAGACGAT CTCATTCCCA GAGCTCTTAA ATCGGGTAAG GGATCTTCAA GCTCCAAGGA 
CCCGAAATCT TCTCAACGCT CCACAACACT CAAGATAACT GTGCGCAACT TAGCCTATCT 
CCAACCCATG TCTGGCTTTT TTGTCATGGC CCACAACGCT CATGCCACTC CGCTCTTCCA 
GCTTGGCGAA CCTGCGACGG ATGCGCTTGC AACTCTTGCT GAAGAGGGCG ACGCGAGCGC 
TCTTGTCAAC ATGTTCAGCG AAATGGAAAC CACGGGCGTG GACCAGTCCT CCATCGGTGT 
GTTCAGTAAC GGAGGCCCGT TGACTCCCTT TGAGTCGCTC ACCTTTGAGG TCAAGGTTTC 
AAAAAAGTAT CCATACGTGT CCTTTGCGAG TATGGCAATC AACACCAACG ACTGCTTTAT 
CGGCATTAAC GCCCGCGAAC TTGTCCCTGG TATGTCGTTC ACGGTTCCCG GCTACGATTC 
CGGCACGGAG GAAAACAACG AGGATTGCGG CTTCATCCCT GGTCCCTTTT GCCAAGACAT 
TAACACTGAC AGTGCCGCCG CTGGAAATGG TGAGGGAGTG GTTCACGTCC ATCGTGGCGT 
GCATGGCGTC GCAGATTTGA TCCCCGCCGA GCTTGATTGG CGCAACCCGA TGTTGTTGGT 
GACTGTGGAG TAGCATAGTA TTGCTACTAA TGCATTGTAC AAGTTGGTTT TGGGATAAAA 
GGAATGCATA CATTTTGCCA AAGTCTGAAC TCAAACTAGT CCATCGCATC ATACCAAGGC 
TTGGCCCACG CTGGTAGTGG AGCAATCACT CCATAGTCTA GGAATAATTC TTCGTGTACA 
GCGATCGGTT TTGTAGCGCG AACAGCAGCG CCAAAGTTTG ATCCGACTCT TCCGTCGAGC 
AGAACCACTT CGTTGGTTCC GGCATCGTAA TACCAGGGGG AGTTGTCGGA ACGAACTTCG 
TTCGGGATCT GGTAGAGTGA TTGTTTGTCG AGCGATGCCT TGAAGTGTGG TGTAAGGACG 
TTCGACCAAG CAAAAGATAG CACGTTCACG TTGGCACGCT TTACAGAATG ATTGACAAAA 
TGTGCACAGG CA 

 

Protein sequence

MLYDYHMDFP EPQFSALSPL HSQAHKFETS SQVISATHPQ LFSFLKLCFF FLTCQQGAAT 
LQGGPMVGES GNQDDLIPRA LKSGKGSSSS KDPKSSQRST TLKITVRNLA YLQPMSGFFV 
MAHNAHATPL FQLGEPATDA LATLAEEGDA SALVNMFSEM ETTGVDQSSI GVFSNGGPLT 
PFESLTFEVK VSKKYPYVSF ASMAINTNDC FIGINARELV PGMSFTVPGY DSGTEENNED 
CGFIPGPFCQ DINTDSAAAG NGEGVVHVHR GVHGVADLIP AELDWRNPML LVTVE