Gene PHATRDRAFT_49278 details

Gene Information

• Locus tag: PHATRDRAFT_49278
• ID: 7195568
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011689
• Strand: -
• Start bp: 456024
• End bp: 458136
• Gene Length: 2113 bp
• Protein Length: 618 aa
• GC content: 51%
• Product: predicted protein
• Protein accession: XP_002183997
• Protein GI: 219127552

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ACCCTGGAAT GCAATGCTGG GCAAACCTAC ACTGTCCCTA TTTTTGGAAT GTACCGTCAC 
AAAAAAAAGA CGTACACCAA ACCAAGCTTC TCCGAAGGAT AAAACCAAAC TCGTGCGCGT 
TCCCTTCCCG TGGCTAGGAC GGAAAAAGGC GAGCCCCTAG AGCCCTTCCT TTGTTCGGTA 
CTGTCGGAAT CAATGGGACT CATGGCGCAG AGCGCCATGA CCGATGGGGG TGAAGACGCG 
TTGGTTAATT CAGAATTAAT GAACGAGGTG CAGTTACAGC AAGTTGATAA TTTTGCGGAG 
ACCGCTGCCG GACAGGACGG AAAGCTTCCT CTCCGTTCTC TCAATACGCA GCATTCTTTT 
CTGAGCTATA TCCAGAAGTC CCCTCTGCTC ACCAAAGCTA GAATTTTTCA AGACAAAGGG 
AGCGAACCAG ATTACCGTTC TACTCACGAG CCTCGTCACC ACGTGCTCTT ACTGCGGGAG 
CAGCAAGTGT CGTTGGAACT TCTCAAGCCC GATCATTCCA GTCAAGCACG AAAGTCTTCC 
CCCATGGTAG CCATGATCAA TATGGTCGCT ACTGTCTGCG GCGGCGGGGT CCTTTCACTC 
CCGCTTGCTT TCTCCAAGGC CGGTATTCTT CCGACTACGC TGCTTATGAT ATACGGCGCC 
CTAACGACCG ATCTCTCCCT TTACTTGCTA GTGGCGTGTG CTCGTCGGAC CGGTGGTCGT 
TCTTACGGCG ATGTCGCCAT GGCGGCCTTT GGTAGTGCCG CGCAAGTCGT CACAACCGTC 
ACACTGACGA CCATGCTGTG TGGGGCGTTA ATTGCCTACC AAGTACTGGT CAAGGATGTT 
TGGACTCCGG TACTCTTGAC TACTGTTCCT GGGTTGTCCG TGTCGTTAGG GAAATTGTCC 
GATCGTGAAG CGTCGAATCT GTTGCTCGCT GGAATTTTGC TGCTGGCCAT GCCGCTCCTG 
CTGAAGAGAG ATTTGCACGC CTTACGACAC ACTTGCTATG TTGGCTTTGG AAGTTGCATC 
CTTCTACTAG TAGCCGTTTT CTTTCGTGCA GCGCAGAAGA TTCGTCACCA AAGCGTGCAC 
GCGGCCATTA ACTGGTACTC CACGGATCCC GCCGATTGGT TGTTTTGTTT CCCGATCGTC 
GTCTTGTGCT TCTTTTGTTC CTACAATATC TTGGAGGTGC ATGCGCAACT CATGCACCCA 
ACTCGACTGC AGATCAAGCG TGTCATTGAC CACTCCATGA TGATTTGCTT GGTCCTCTTT 
TATACTGTCG GTCTCTGCGG GTATTTATAC GCTGGTACCG CTACTGCCGA CAACATACTT 
TTGAATTTTC CTTTTCAAGA TTCGGCCGTG TTGGCCGGCC GGATTGGCTT TTGCTTTACC 
CTTTTGTTTG GATTGCCTCT CGTGCTCTTA CCCTGTCGAG AAGCGGCACT TTCTATTCCT 
GCGCATTGGC GGGCTTGGCG TCAGGACGTC GCAGAAACGC GCAAGTTTCG ACTGCTGGCC 
AGGGAACGAA ACAATTACGG TGCGCACTTA ATTGTCAACG GTGTCGACTT CGATGCGACG 
GAGCCACATC TTGTGAGCAA GACAAGGCAC GGTGCCTCGC TCAGGTACGG AACGGCGTGC 
ATTGAGCAGA CCTTGTCAGC GGATGAAACC GACGGCACGG CAACGAATAG TGCGAATAGC 
TCATGGACGC AATTGGTTAA TAGCGACGAA CAGGGTATGA GGACTGTGGA TTCATGCCCA 
AACGACTGTT TTTTACAGAG CTGGAAAGAA CAGTTCAGCA ACGTTGTACC AACAGTTGTG 
ATTCTTCTCG TAACCTATTT TGTCGCCATC AGTGTGCCGG GAGTGGCGGC TGTATGGAGT 
ATTTGTGGCT CCAGTATGGC TATATGGATT GCCTTTATCG TTCCTACGGC GTGCTATCTA 
AAAATCCGTG AGCACAAGGG CTTGACGCTG CTTGCGTCGG CTGCATGGCT TCTCTTGATT 
ACGTCAGCCA TTGCAATGGT TTTGTGCACG CGACAAGCGG TCCAGAATGC TACCTCGGGA 
TCCTTTTAGA TCAATCTCAT ACTTTAATTT TAAATTTTGT TTGTAGTAAA TTAAGAAGAG 
CCATTGTGCG GTT 

 

Protein sequence

MGLMAQSAMT DGGEDALVNS ELMNEVQLQQ VDNFAETAAG QDGKLPLRSL NTQHSFLSYI 
QKSPLLTKAR IFQDKGSEPD YRSTHEPRHH VLLLREQQVS LELLKPDHSS QARKSSPMVA 
MINMVATVCG GGVLSLPLAF SKAGILPTTL LMIYGALTTD LSLYLLVACA RRTGGRSYGD 
VAMAAFGSAA QVVTTVTLTT MLCGALIAYQ VLVKDVWTPV LLTTVPGLSV SLGKLSDREA 
SNLLLAGILL LAMPLLLKRD LHALRHTCYV GFGSCILLLV AVFFRAAQKI RHQSVHAAIN 
WYSTDPADWL FCFPIVVLCF FCSYNILEVH AQLMHPTRLQ IKRVIDHSMM ICLVLFYTVG 
LCGYLYAGTA TADNILLNFP FQDSAVLAGR IGFCFTLLFG LPLVLLPCRE AALSIPAHWR 
AWRQDVAETR KFRLLARERN NYGAHLIVNG VDFDATEPHL VSKTRHGASL RYGTACIEQT 
LSADETDGTA TNSANSSWTQ LVNSDEQGMR TVDSCPNDCF LQSWKEQFSN VVPTVVILLV 
TYFVAISVPG VAAVWSICGS SMAIWIAFIV PTACYLKIRE HKGLTLLASA AWLLLITSAI 
AMVLCTRQAV QNATSGSF