Gene PHATRDRAFT_49151 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_49151 
Symbol 
ID7195651 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011689 
Strand
Start bp76354 
End bp77838 
Gene Length1485 bp 
Protein Length345 aa 
Translation table 
GC content52% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002183806 
Protein GI219127155 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTTCTCACAA TTCGAGTGCT ATTGACTGTG TTCGCAGACA AGGTTTGCGA GTTTTCCGTA 
AAAGACCAAC GACCAACGTT TCCACTCTTC CTTTTCTACC ATGTCGTTCA TGAAAAAGAC
AGGCAAGGCC TTGGCCGACG TGATTCCCGG CTTGGGCAAG TTCACGTTCG ATTCGGATCT
CGGCACGGTG TTTATCACGT CCGGAACCGG AGTGATTGGT TACCGTGTGG CGCTCAGTCT
CCTCGAAGCG GGGCACAAGT CTGTGCGTGT CGGTATCTGG TACGGTGATC GTCAGATTGG
CGGTGACGAC AAGTCCTTTG CGCAAAAGTG CGCCGAAACT CTCGAAGCCA AGGGCGCCGA
AGTCGTCGAC TTTGACTGGG GCAACGAAGC AAGCTTTGAA AACGCGCTCA GCGGCGCCAA
GACGGTCTTC TGCACCATCC CGCACATGGA TCACTGGTCC GACGTCTTCC CTACCTTTCT
CAAAAAGTCC AAGGAAAAGA AGGTCGAGCA TTTCATCAAG GTCTCCTTCT TGCGCAAGGG
CGCCGCGGCC GAACGCTACC GTTCCAACGT GCAGTTTGCC GAGTTCCACG GCACCTGTGA
CGACATTCTC GAACACGCCA AGTCCGACTC GCGCATTTCC TACACCATCC TCTGCGCGTC
GCATCTCATG AGTACCCCCC TTATTCATCA AGGAAAGATG CTCCGCGAAG ATCACAAGTT
CATTACGGCG TCCTACGGGA TGGGAGTCAA CTACGTGAGT CCCAACGATA TTGCCGACGC
TGCCGTGGTG GTCCTCATGG ACCGCAAAAC ACACCGCAAC AAGGTCTACA ATCTCTCCGG
ACCTGGTCCC ATTACTGATC GTCAAGTCAG TCGCCTCTTG ACCGAATTTT ACGGCACAAA
CATTCAGCAC ATTGAAATGG GCTACCACGA CTACAAGAAG GATGTCAAGG CCCGTGGCTT
GCCCGATTGG CTCGTACGGG ACTCGGCGGA ATTTGAAAAA ATGAAGGCCT CCGGAGTCGA
CGAGCTCTCG AGCTCGTACT CGCCCGATCT CGAAAAGATT ATCGGCAAGA AACCGGAAAC
CTTCAAGGAC TATTTGCAGA ACAAGTCCTG CATGCGACCT GGTGCCACGT TTCCGTAACT
ATTTGACGGA ATGGACGAAA CTTACACGGA CGGGTAGTGT TGGGCTGTCG TGGTTGGAGG
TGGTGGACTG GGAAGGATGG AAAGAGTAGT CTGGATAGCA AAAGTGTCGG TATTGTACCA
GAAAAACACA ACTTTGATCA TGCGTTGTGG GACGAGGAAA GTGTCCAACG AGCTTCGACG
ATGATTGAAT TGTCGTTGCA TGTGGCCACG GCTGTATTGT TGGTGCTGTT GGGCTGGGCG
TTGGGTTTAC TACACTCGTG ATGTGTGAAA CGGACTGGGC GGCTGGTGGC GGTACAAGCG
TTTAGTCTAG AGTATACGTA AAATATAAGC AGTAAATCGA AAAAA
 
Protein sequence
MSFMKKTGKA LADVIPGLGK FTFDSDLGTV FITSGTGVIG YRVALSLLEA GHKSVRVGIW 
YGDRQIGGDD KSFAQKCAET LEAKGAEVVD FDWGNEASFE NALSGAKTVF CTIPHMDHWS
DVFPTFLKKS KEKKVEHFIK VSFLRKGAAA ERYRSNVQFA EFHGTCDDIL EHAKSDSRIS
YTILCASHLM STPLIHQGKM LREDHKFITA SYGMGVNYVS PNDIADAAVV VLMDRKTHRN
KVYNLSGPGP ITDRQVSRLL TEFYGTNIQH IEMGYHDYKK DVKARGLPDW LVRDSAEFEK
MKASGVDELS SSYSPDLEKI IGKKPETFKD YLQNKSCMRP GATFP