| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_54973 |
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| Symbol | |
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| ID | 7195260 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011688 |
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| Strand | - |
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| Start bp | 243234 |
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| End bp | 245088 |
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| Gene Length | 1855 bp |
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| Protein Length | 467 aa |
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| Translation table | |
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| GC content | 54% |
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| IMG OID | |
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| Product | endo-1,3-beta-glucosidase |
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| Protein accession | XP_002183706 |
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| Protein GI | 219126944 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CACATATTTA GACACATTTT TTTGCAAGGC CATCGGATTG CCAAACACCC TATCGCATTG
GAGGTACCGC ACCGTACTAA ACTACTATAC ACACTCACGT ATCACCACTA CCCCTTCCAA
TAGTCTCAAA TTCAAAATTT CGATCAAGAT GCATACCCGG ACCATCGTCG CGTTGATGAG
TACCGCTATT GCGGTAGGTA TCGTCGCCGC TCAAACTCCC GTCTGGAGTG AAGAATTCAA
TGGCGATAGT CTCGATACCA ACGTTTGGTC GTACGATTTG GGTGCCGGTG GATGGGGCAA
CGGTGAACTC CAAACCTACC GCGAAGAAAA CGCCGTCGTC CGGGACGGCA ACCTGTTGAT
TACGGTACAA CGCGAAGGCA GTGGAGGCTT TTCGTCGGCA CGCATCAAAA CCGAAAACAA
GCTCTCGTTC AAGTACGGAA TCGTGCAAGC CAATATTTCC GCTCCGGATG TGATCGCCGG
GCTCTGGCCA GCCTTTTGGA CCATGGGCAA CGACTTTGCC CAAGTTGGAT GGCCCGCGGC
GGGAGAATTG GGTACGTTAC ACACCTAGCG CCGCCCAAAC ATTCTCCAGG GTTCCTCGAT
ACCGATACCG TGTGTGCCTG TCTGTCCATC TTTTCTCATA CTCACGTTCC CCTCTCGACA
GACATTATGG AAATCGGACA AGGCCTCGGC ATTGCGGAAG GAGTCGGCAA CAAACGTCTC
GTTTCGGCCG CGCACTGGGA ATTCAACGAA ACACGTGCAA CCTACGCTCG CACGTTTGAT
CACCCGACCG ATCTCAACGG AACCTACCAC GTTTATAAGA TGGACTGGAC TCCCACGCGT
ATTAGTACGT ACGTGGACGA TTTCATGATT TGGGACATGC TCATTGATCC GGAAAACTGT
GTCGATTGTG AGGAACTCCA CAGTCCACAC TTTTTCTTGT TAAACGTTGC GGTGGGTGGA
GGTTTCACTT CGGGCAGTTC TTCCAGCAGC TCGGGGGGAA GCAGTGGCAT CGGTAGTTCC
AGCAGCGGCG TTGGTAGTTC CGGATGTGGC GGCTCTTCGG GATCCTCGGG AGTTAATGCA
TGCGGAGGCC TTTTGACTCC CGAAGGGATT ACGGCTCCTC TTCCCGGTAC CATGGCGGTG
GACTTTATCC GCATCTTTGG GAACGACTTT ACCGAAATCA ACGTACCGGT ACAAACGGCA
TCCAGCGATA GCCCAACCAC CACACCAGTT TCGTCACCCA CCATGGCCCC CCAAACCGGT
AGCCCTACCA CCGCACCAGT TCCAGCCGCA ACGTCCACCA AAAGTCCCTC GGCGGAACCG
GTCGTCGCCG CCTCCACCAA GGCCCCTTCA GCTTTACCGG TCGCAAAGAG CTCCACGGAC
GCTCCGACCC GGGCCCCCGT AGAGAGGTTG CCCACCAGTA GCAAGAGCGG AAAGGGTAGC
AGCTCCAAAT CGGGTGGAAA GAGTAAAAGC TCCAAGTCGG GCGGAAAGAG TAGCAGCTCC
AAGTCGGGCG GAAAGAGTAG CAGCTCCAAG TCGGGCGGAA AGAGTAGCAG CTCCAAGTCT
GGTGGAAAGA GTAGCAGCTC CAAGTCTGGT GGAAAGAGTA GTAGCTCCAA GTCCGGTGGA
ACGGGTAGCA CTGAATCTTC CAGCGATTCG GAGTCCCACC ACCTCGGCAA CGCGATCCGA
AAACGTGTTC TCCAGTGCCC AGTCGGCGTC GGTTAGCGCG GCACTGCTGG TGGCATCTGT
AGCTTGGGCA TTCCTTTTGT AACGAAGTCG TTTTTGTTTT TACGTATACA TTCCAACAGG
TTGTAGCAAT GATAGATTAG TCAAGTATTT TGATTAGTTA CCATATTCCC GTACT
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| Protein sequence | MHTRTIVALM STAIAVGIVA AQTPVWSEEF NGDSLDTNVW SYDLGAGGWG NGELQTYREE
NAVVRDGNLL ITVQREGSGG FSSARIKTEN KLSFKYGIVQ ANISAPDVIA GLWPAFWTMG
NDFAQVGWPA AGELDIMEIG QGLGIAEGVG NKRLVSAAHW EFNETRATYA RTFDHPTDLN
GTYHVYKMDW TPTRISTYVD DFMIWDMLID PENCVDCEEL HSPHFFLLNV AVGGGFTSGS
SSSSSGGSSG IGSSSSGVGS SGCGGSSGSS GVNACGGLLT PEGITAPLPG TMAVDFIRIF
GNDFTEINVP VQTASSDSPT TTPVSSPTMA PQTGSPTTAP VPAATSTKSP SAEPVVAAST
KAPSALPVAK SSTDAPTRAP VERLPTSSKS GKGSSSKSGG KSKSSKSGGK SSSSKSGGKS
SSSKSGGKSS SSKSGGTGST ESSSDSESHH LGNAIRKRVL QCPVGVG
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