Gene PHATRDRAFT_48985 details

Gene Information

• Locus tag: PHATRDRAFT_48985
• ID: 7195257
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011688
• Strand: -
• Start bp: 227738
• End bp: 235064
• Gene Length: 7327 bp
• Protein Length: 2198 aa
• GC content: 49%
• Product: predicted protein
• Protein accession: XP_002183703
• Protein GI: 219126938

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCAAAC CCCGTCCAAT TCACACCTTG CATCGCGAAA TTCGTACGTC TCCGGACGAG 
TCGGAGCCGG CCTTCTCCTA CGAAGAACAA CGCACCGGCT TTTTACACCG GGAAGACGAA 
GTCGCCGAAG ACTTTCACCA ACGTTACGCC GTGCACAGTA AATCGCGGAG AGATAGTGGA 
GGTGGCAACA GCAATGCTAG TGCAGGGGGA AATGGCACAA GCACAGGCGG AGGCAGCTTT 
TGGCGAACGA GCGAAGCCGG TAGTACCGGA CCCGCCTTTG CTAGCGTCCA CATGAACAGC 
GGAAAAGATC AGTACACTAG TAACAGTGCT CGGAAATCAA CGGGAGTTTT GGGAGCAGCT 
CTGGAGTCGC ACGATTCTAC CGACTCGGTA GAACGTGGAC AAAGCGATTC CAGTCACGCC 
ACTCCCACTG CTGCTACCGG AACTGCTTTG CATTCCTTGG TACGTACGAG TGCTGTTTTC 
CGCAAATGCT GAGGATTTGT GGGACGCCAG TTCTCTCGTG AATATACGTC GTACTTACTT 
GCCTGTGTCC CTGTGTGTTG TTGACGTTTC GTTTTGTTGT ATTGCAGTGG AACGGTGGTC 
CGAATAGTTT GCACGGAACG ACCCCACACG AAATTTTACG CCGCAAGGAA TCTTCCATGT 
CGGTATGCTC TAACGCATCG TGGGAAACTA TCACGACGTC GACCACCACC AAACCCGTAC 
TAGCCAAAAA GAAAAAGGAA AAACTCGTCG ACAAACAGCG CGCAGCCGAC CGCCGTCAAA 
AATGGGACTC GCAGAGCGCC ATTATCGATG CTTCTATTGC TACCGGTCCT GCTTCTGCTG 
GTGGTGGGCA GAATGGAGAC TCGAATTCTG CGACGACAAT CATGACCACA CCCAAGGTTG 
TGGTGGTGGC GCCACCCAAC TTTTCCGAAA TGACGCACGG CTCCAGTTTG GAGCGGTCGT 
CGAGTGATCA GTCGACGGGA TCGTTACTGT ACGGAAAAAC GCCGCATTCC GGATCCCTGT 
TGGGGAAATC GAGTTCGCTC ATCTTTCCGA CGGGTGTCGA CGCCAACGCG GAAGCCGACT 
CGGAAGCGGA CAATTTGAAG CGCCGCAAAA TTAATTTGCT CCTGGATCAG TGCGAATCGG 
TGCGGTTTCC CTTCAATAAA AAGAAACTGG TACTCAACAA CATGAGTTTG ACGGCTGCTG 
ATTTGCCCCT GCAGTATCTC GTCGGAACCA GCCTGGGTAA CACCTTACAC AAACTTAGCT 
TGACGGGGAA TCGGTTGGGA TCCGTTCCCG CCAAGTTGGT CCAGCACTTA CCCTTTCTGA 
AGCACTTGGA TATTTCCCAA TGCGAGTTGC ACCAATTGCC AGACAAATGG AATTTGCCGC 
AACTCAAGCG CCTCAACGTT AGCCACAATC GATTACGGGA TTTCCCCGAA GAAGTAAGTA 
CTGATACTTG TCAGTCCACA TTAAAGTACT GGTTACCCGT GCGGGTGAGT ACTAGATCTA 
ACGATATTGA CATTGTCTCT GTTTGTAGGG TATTTTGGAA GGCTTGCCCG AGCTGCAGGA 
GCTCAACATG TACGGCAACA AGGTTGCAGA AATTATCATT CATCATAATA CGACAGTTTT 
GTCTAAGTTG GAAATCTTGA ACCTCGGGTA CAACGATTTG GCCTACTTGC CGGACGATCT 
AGATCAACTC AAGGCACTGA AGACTCTCAA AGTCATGAAC AACTTTTTGG AGAAGGTTCC 
TATGCGTGTT TGTGAAATGG AGTTGAAATT GATCGACGTC TCTAGCAATC CTGTAATTCA 
ACCTCCCCAA GAAACGTGTG ATCGTGGCAT CTGCAGCATG CGACGATACT ATCACTGTTT 
GCGGATGGAG GAACAGTCCA AACAGCGAGC CCTGGAAGAA GTACAAAAGA AGGCACAAAA 
AGGCAAAAAA GCTGTGCCAA AGAAGAAGTG TTACGGAGGC TTTATGAAAT CGTTGACAAA 
GCCGTCACGA AAGAATACTG ACGACAGTGC TATGGCGAAT TCTGTTGGTC CTGTTCAGTC 
GGGAGCGCAT CTGGATGACG GGCACTACGT AAACGAGCAA GGTGCCTTTG CTTTAAAGGT 
AGCGCCAATG GAAAGAGACA CGTCCTCCGT TGATTTGGGA AAAGAAAGAA GTCTTCAACA 
ACGACTAACA TCAGAATCGT CTGAGGAAGT GGTCGAGTCA GTGGCAGCTT CATCGCCCGT 
TGTGGACGCG TACGATCAAG TGACGGTGAA CGATACGCTA AAAGTGATCT TTGTTGGAAT 
GGCAATGGTA CGTGTTATGA ATCCGCTCGA CGGGAGGTTT TGGATAGGTT GTGGCTAATC 
TCGTTTGCTG TCCCAGGTTG GAAAAACATC AATGATCAAA CGTCTGATTG GAGGTGAAGC 
TGCGTCTGTA CCAACGCATG ACCAAAGAAC CGTCGGTGTC GATATTTATC AATGGAATCC 
GAAGGAAGAT GTTCGCTTTG AACATATCGA TTCTCGAATC GAATTCCAGG ACGAAGAACT 
TTCGGCAGCT TGTGGCGATG TGGATGTTAA ATTTAGCGTT TGGGACTTCG CCGGGCAGCA 
CGTTTATCAC GCAACACACG AACTGTTCTT CTCTTCACGC GCGCTATACG TTCTTGTATG 
GGACATGGGT GCGATGAATC GAGATACAAT GAAACGGAAA GGGTCCTTGC TGGAAGATAG 
CGAAACTGGG GCATTCAAAC TCTCGTATGA CTCTTCCGAT GATGAGTCTG TCGGAGATTG 
TGACGATGAC AATTTTGCAG TGGAGGAAGA AGCACGTCGG GCTGATCGTG CCTTGGAAAG 
GGATATTGAC GAAAAGGTGC AATTTTGGGT GGACTGTATT CAGAGCAGCT CTCCTGGTGC 
CGCCATACTC CCAGTATCCT CTTTTGCCGA CTATTTCGCT GGTGATGATT GCGAAGGAGA 
GGCGAAACGC AGATGCAACA TGCTGAAGAA CCGTCTCTTA AAGCATGAAA GACGCCGGAT 
CAAAGGAATC AAGAAGCGGT TGAAGGACTA CGTCGATCAA AATCGTGCAG ATGACCCGGC 
TGCATTGCGA TTACGCAAAC TGCTATGCCC TTATACCCGG CCGAAGCTTA TTTTTGGCAA 
TGACGAAGAC AGCGTGGTAC GAGTCAGTGG CACGCAATAC ACGGGGTTCG ATCGTTTGAC 
TTCCAAAATT ATTGATATTG CCAGTGGACG GGACAAAGGG CAGTGGCGTT ATCCAATTTT 
TCATGGCCAT GTTGGGGCTC GGATTCCACG GATGCGCTTG GAAGTTCGCG AGGCGGTTAC 
TCACATGCGT TCTAAATTCA TGGTTGTTGA GTGGGGCTAC TTTATTAATC AGCTACGTGA 
TCGTGGGCTA ACAAGCGTAG AAGATATAAG CGATGCTCTT CATTTTCTGA CAAATATTGG 
CGAGCTCTCT TATTTCGGGG GTGTCATGAC CACAAAAGAC CAAGTCGCCA ACCCAATTAA 
AAAGGTACGT CTGGTTGTCT AAGATTTCTT TTTTGTTTAC ATTGGATTTT CTCACCTATT 
CACTTTCATT TGGAAGAAGT CGGATAAGGG ATCAGAAAAT GATCAAGGAG AGAAGGGTTC 
CATGGCAAGG GAAAGATGCG ATGGCAATGA TTCTGACGTC GATGATACAG ATCCTGACAC 
AGCTGTTCTC TCTATGGATG ACACAAGCAT CACAGCCCAG AGCACAGCAG ATGGATCGTT 
AAGTACTGTG GACGACTTCA TGTCAAGCAG TCTTTCGCAG TTTGTCTTTT TGAATCCGAG 
ATGGCTTGTA ACGGCTGTGG CATGTATTCT ACGTCATGAC CTAGACCGCG AGATAAAGGA 
AACACGACGG ATGACCTCTA TTGGCCAAGG GCGTCGACTA GCACGTGATA CAAGCTTTTA 
TGATGCACAA ATGAATTGCC CGGTTATTAC CGCCGAAGAC GCCTGTCTTT TATGGCAGAC 
CAAAGGAATA ACGAAAAGAG CCGCAGAACG AGCGCAGAAG TATTCAAACA ACATGACTGT 
GACTCCGTTT GAGTTTTTGC AGCTATTGCT GATTCGTTTT GGTGTTTTCG TTCCCATCGA 
TCTTAGTATC GATAAGGCTT TTCTCGGAGG ACACGAATAC GCCCAATTGG TTGACAGTTT 
ATGTGGACAT GCACCGACTC CGGAAGAAGT TGAAATTATC GTCGACTCTG ACGAGGTTGC 
GCCAAAGGCT GAATTTTTCT TTTTGCCCAG TCTACTTGGT TCGAGTGAGC CTGCGGAGGC 
ATGGACATAC AAGAATACGG ACTCCTGGAA AACGACCTTG TGCCATTCTA TTTTGTTTCC 
CGATGGCGTC CCACCTGGCC TGATGGAACG TCTCACGGCT GGAGTTCTCA GCTCCATCTA 
CGCCGTCGCC CATCGCAAGA ACGTCTCTGG TCAAGACTTT CTGGGTAATG ATATTGCGAC 
TTACGAAGGA AAGCTTACTG TCAAAGAAGT TCTTTGCTGG CGCACTGCTT TCCTACTCAA 
GCTTGGCACT CAAGTTACTG CTGGCGACGG GTCTAGCAAA GAGAGCATAG TTGAGATCAT 
TGCGCTACTT GCCGACCGCG ACTCTCATCT TTGCGTTGGT TCAGCATACA TGGGCATTGG 
AATGCGACGA CTGATAGTGA GTGGCCGTGG CCAAGTAGGG GATGGGGGTC GCAAAATCTG 
GAAGGGAGGA TATCTGCTTG TTTTGAAGTG CGTTCGCCGC GTCATGGACC AATACGGAGG 
TCTTGAGTAC GAGAAGCAAG CTTTTTGTCC AGAATGTTTG GCTAAGAAAG GCGTCAGCGA 
GGCCAGCTCA TGGGAGTTCA ATTCTATCCG TTCGTCTGTA CTGAACGGTG AAGGAAATAT 
TCGTTGTCAG CACGGTCATC GAGTCGATAC TCCACTGGTC GCTGGGCCGA TTGACGTGTT 
CCCAAAGGCC AAGCAGGAAG CCTTCACACA GCCAAGCGAG AGTGGTTTAG ATTCCAGCGT 
CCCTGTCCAG GACCTTCTGC GGGCGATCGT CGTTGTTGGA CTCTGGGACG GTAAAGAACG 
CAAGATAATT CGCGTAGGTT CAGGATTTAT TGTTGACCGC AAGCACGGCT TAATAGTCAC 
GGCGAGTCAC ACACTCATGA ATATTTGGGG CGATAAAAAC ACACCATTTG GGGAAAATTA 
CTACGGTTTA CGTCAAGGAA AGGTGGTGAT TGGAGTCATT CCTCGGGAAA AGGAAGGCGG 
GGACGCAGGC AACAAAGATA TGGCGGTATT TCGCTACTTT GCCACTATTG TCGCCAAAGA 
TCCAAGTATG GAACGGGGCG AGTGTCACTT AGACGCTTGT GTACTACGCA TTACAACCCG 
CATGGAGCAA GACGTTGGCG GATACGGAGA CGGTTGCGGC GACCAGCCAG AGCGTTTGCT 
TCTCAACAAT CCAGTAGCAA TGAAGAAAGA GAAACTGCAA GCACTCAAGA TTACTGACAA 
GTGTGAGCTA GAGGAACAGG TTCGTATTCT AGGGTATAAT CAAGGCGGCG AAGGCCGTTT 
GTTACCAGGC GAAAGTCTCA ATCGCTACGT GGACTTTGCT CGAGGCTACG TATGCAAACG 
ATTTGCAAGC GGCGAAGAAA GCGGCAACAA AGTACGCGAT CTGTTCAAAC CTCGTCAAGA 
AATCGTTGTC ATTTGTCCAA CGATTGGTGG CCATTCAGGT GGACCTTGTG TGAATCAACA 
GGGTGAAGTT ATCGGCATCT TAAGCCGTGC CGACCCTGCG GAAAACCAGC GATGCTACAT 
TTCACCTACA TCTGAATGGG TTGCACTAGT GAGGATGGCA CGACGAGCAC TTTGAAAACA 
TACTCAAGGT CAACGTTATG AGCTTCCTCG ATATGTGCCT CAACCTTTAA AATTGTGTCT 
TCAGTTCTAA CAGTAAATAT TGTATTTTTT GTTCCTGCGT GAGATTTTTC GTTGTCACAT 
CACTCTTTTG TGTACGGATT TGTCCATTCT TGAGATGACG ATCCTCGTAT GATCGCTTCC 
TGTGAACGAG ATTTTTGTGT TGATGAGCGA AGTTTGATTT GCAGTCAGCC GACTGTGAAT 
TGAGGAAGGC GCTTGCATAC GTGCCATAGC TGTAGTGTTA TTGTTAGAAA CATCTCCAAC 
GTTCCAGTGA CTGTGAGTTC TTGCAGATTT TTAGTCCCAC CAGACACGTC ACCAGCTGGT 
TTTTGGAGTT TTCTCACTGT CGCTACTTCG CACGACACAC GACGATGACA TGACCGTGAA 
CCAGAATCAC ACTTTGCCAG ACCACACAGT TAGCATGAAT GCTTGCCAAA ATAACATGAT 
TACGCTGACG AAACGGACGC TACCGCAGGC CATACACCGG CAAACTCAGC GACGTGCGCT 
GAATATACTG AGCCGGATCG TAACTTCCAA CGCTGAGCAA CAGCGAGATT TGGATAGCGC 
CATCAAAACT GTGCGCCTTC ACGACCCAGC TGGGTATCTC CCGGGCCTTT TGCTGCCGGA 
ACGGCGAATG CAAAAAGCAT ACTACGCAGT CCGTGGCTTT TGGATTGAAA GTGGTCTAAG 
ATTTGGAAAC TCTGCAAAGA TATCAAAGCA CTCATCACCC GAGGAACAGC TGAAGTGGTG 
GAAACAAGGT GTTGACGCCG TCTTCGCTGG TGATGTGTTG ACCGTGAACC AGAATCACCA 
TCCGACTTTG CGACTCTTAC AATCTCTCTC GACTGAGGTT CCTTGGACCA AACAGCATTT 
CGATGACATA ATTGATGGAA GAGCCAAGGA TTTGAATGTA AAACAATACG AAACCGTTGC 
GGATCTTACC AGGCATGCGG AGCAGTCTTG TGGCACTTTG GCCGAACTAG TTTTGGAAAG 
TGGGGAAATA ATGCCCGACA TTTCCCCTGC TTGTCACGAG GCTGCCCGTC TAGTCGGTAT 
TGCTCACGGC GTAACCAATG CACTTCGTTT GAGCATTCCT GTCATCAGCA CAACCGGAAA 
ACTGATCATT CCCACGGAAC TGACGACAAA ATATGGCGTG CGCAGTCCCC GGTACTTACT 
TTCAGCGTTG GGTCAAGGTG ATAAGGTCTG TTTACGAGCC ATGGAAAACG CAGTACGAGA 
CATCGTCGAG ACGGCAAGAG ACAACTTGCA GAAAGCCCGC GATCTACGCG AAGCGATACT 
AGCGGAACCA AACGGGAACA AAGCCGTTTC TGTTTTGTTA CCTGGATTGG CGTCAGAGAC 
CTTCTTGAAT AGACTGGAAA AAAGTCAGTA TCAGCTGACA GATCGCAACT TACGTAATGT 
CGGCTCTTTG GAACATGCAG TTTGTGCTTC AAGAATGACC TTGGCCTATT TCCAAAAGAA 
CTTTTAG 

 

Protein sequence

MSKPRPIHTL HREIRTSPDE SEPAFSYEEQ RTGFLHREDE VAEDFHQRYA VHSKSRRDSG 
GGNSNASAGG NGTSTGGGSF WRTSEAGSTG PAFASVHMNS GKDQYTSNSA RKSTGVLGAA 
LESHDSTDSV ERGQSDSSHA TPTAATGTAL HSLWNGGPNS LHGTTPHEIL RRKESSMSVC 
SNASWETITT STTTKPVLAK KKKEKLVDKQ RAADRRQKWD SQSAIIDASI ATGPASAGGG 
QNGDSNSATT IMTTPKVVVV APPNFSEMTH GSSLERSSSD QSTGSLLYGK TPHSGSLLGK 
SSSLIFPTGV DANAEADSEA DNLKRRKINL LLDQCESVRF PFNKKKLVLN NMSLTAADLP 
LQYLVGTSLG NTLHKLSLTG NRLGSVPAKL VQHLPFLKHL DISQCELHQL PDKWNLPQLK 
RLNVSHNRLR DFPEEGILEG LPELQELNMY GNKVAEIIIH HNTTVLSKLE ILNLGYNDLA 
YLPDDLDQLK ALKTLKVMNN FLEKVPMRVC EMELKLIDVS SNPVIQPPQE TCDRGICSMR 
RYYHCLRMEE QSKQRALEEV QKKAQKGKKA VPKKKCYGGF MKSLTKPSRK NTDDSAMANS 
VGPVQSGAHL DDGHYVNEQG AFALKVAPME RDTSSVDLGK ERSLQQRLTS ESSEEVVESV 
AASSPVVDAY DQVTVNDTLK VIFVGMAMVG KTSMIKRLIG GEAASVPTHD QRTVGVDIYQ 
WNPKEDVRFE HIDSRIEFQD EELSAACGDV DVKFSVWDFA GQHVYHATHE LFFSSRALYV 
LVWDMGAMNR DTMKRKGSLL EDSETGAFKL SYDSSDDESV GDCDDDNFAV EEEARRADRA 
LERDIDEKVQ FWVDCIQSSS PGAAILPVSS FADYFAGDDC EGEAKRRCNM LKNRLLKHER 
RRIKGIKKRL KDYVDQNRAD DPAALRLRKL LCPYTRPKLI FGNDEDSVVR VSGTQYTGFD 
RLTSKIIDIA SGRDKGQWRY PIFHGHVGAR IPRMRLEVRE AVTHMRSKFM VVEWGYFINQ 
LRDRGLTSVE DISDALHFLT NIGELSYFGG VMTTKDQVAN PIKKKSDKGS ENDQGEKGSM 
ARERCDGNDS DVDDTDPDTA VLSMDDTSIT AQSTADGSLS TVDDFMSSSL SQFVFLNPRW 
LVTAVACILR HDLDREIKET RRMTSIGQGR RLARDTSFYD AQMNCPVITA EDACLLWQTK 
GITKRAAERA QKYSNNMTVT PFEFLQLLLI RFGVFVPIDL SIDKAFLGGH EYAQLVDSLC 
GHAPTPEEVE IIVDSDEVAP KAEFFFLPSL LGSSEPAEAW TYKNTDSWKT TLCHSILFPD 
GVPPGLMERL TAGVLSSIYA VAHRKNVSGQ DFLGNDIATY EGKLTVKEVL CWRTAFLLKL 
GTQVTAGDGS SKESIVEIIA LLADRDSHLC VGSAYMGIGM RRLIVSGRGQ VGDGGRKIWK 
GGYLLVLKCV RRVMDQYGGL EYEKQAFCPE CLAKKGVSEA SSWEFNSIRS SVLNGEGNIR 
CQHGHRVDTP LVAGPIDVFP KAKQEAFTQP SESGLDSSVP VQDLLRAIVV VGLWDGKERK 
IIRVGSGFIV DRKHGLIVTA SHTLMNIWGD KNTPFGENYY GLRQGKVVIG VIPREKEGGD 
AGNKDMAVFR YFATIVAKDP SMERGECHLD ACVLRITTRM EQDVGGYGDG CGDQPERLLL 
NNPVAMKKEK LQALKITDKC ELEEQVRILG YNQGGEGRLL PGESLNRYVD FARGYVCKRF 
ASGEESGNKV RDLFKPRQEI VVICPTIGGH SGGPCVNQQG EVIGILSRAD PAENQRCYIS 
PTSEWVALSH QTRHQLVFGV FSLSLLRTTH DDDMTVNQNH TLPDHTVSMN ACQNNMITLT 
KRTLPQAIHR QTQRRALNIL SRIVTSNAEQ QRDLDSAIKT VRLHDPAGYL PGLLLPERRM 
QKAYYAVRGF WIESGLRFGN SAKISKHSSP EEQLKWWKQG VDAVFAGDVL TVNQNHHPTL 
RLLQSLSTEV PWTKQHFDDI IDGRAKDLNV KQYETVADLT RHAEQSCGTL AELVLESGEI 
MPDISPACHE AARLVGIAHG VTNALRLSIP VISTTGKLII PTELTTKYGV RSPRYLLSAL 
GQGDKVCLRA MENAVRDIVE TARDNLQKAR DLREAILAEP NGNKAVSVLL PGLASETFLN 
RLEKSQYQLT DRNLRNVGSL EHAVCASRMT LAYFQKNF