| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_39727 |
|---|
| Symbol | |
|---|
| ID | 7195445 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011688 |
|---|
| Strand | + |
|---|
| Start bp | 554516 |
|---|
| End bp | 555751 |
|---|
| Gene Length | 1236 bp |
|---|
| Protein Length | 411 aa |
|---|
| Translation table | |
|---|
| GC content | 50% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002183631 |
|---|
| Protein GI | 219126788 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGGGAC CCCATTTCGA ACCATGGTTT ATCCTGGCTA GTCGTCCCTC GACAGCGACG
GACGAGCAAA GTGCGGGACG AAAGGCTCGC TATGCGCTTG GTCTCACTTT CATCATGATG
CAGTGCATCG TATGGATCTG TGCATCCGTC ACAACTCAGT ATTTATACGG AGGACAAGGC
TTTCATTCGC CGTTTCTCAT GACCTTTGCT GGTGTTGGTA TGTTGGCCAT ATTTTTGCCG
TTGCGACTTC TAGCTGTTCG AATTGGGATA GCTCCGAAGC TCCTCAAAAG TACAGAGGAT
GCAGATCCTG CGGTCAACAA TGGTGTTGGC AATAGTCACG ATGAAAAACT CGCGCAAGCC
ACATCATACC ACCAAGTTTT TGATGCTGTT GCCTCCGAAC GGCGTGAGCT GTCCCATCCT
ACAACGTTCT GGAATCATCG CAAACATGCT TTAGCTGCGC TTCACATTGC ACCCGCCATG
TTCTTTGCCG ACTGGTGTTT CAATCACGGG CTAGCATACA CATCTGTCGC TTCAAGTACG
GTTCTAGTTT CCACTTCCTG CGTCTTCGTT TTCTTGTTCG CTGTTCTGGT GCGAGTCGAG
GCCTTTCACT CTGTGAAACT TGCTGGCGTA CTGCTCGCAG TGGCGGGTAC CGTTTTAACA
ACGATGGGCG ATATTTCCGT CAGCGAGGAA TCTAGCGGTG TGGATGCCGA AAGACATGTT
TTGACAGGCG ATCTCTTCTC CCTCATGGCA GCCATTGGCT ACGCATTTTA CACTGTACAA
GTCCGTGTTT TGTGTCCTCA AAACGAGGAT CTTTACAGCA TGCAGCTATT GCTCGGCTAT
GTTGGTGTAG TTGCCACCAT ACCGCTTCTA CCCGTTGCGT GTTACGCTTT GACGCAAGTC
ACATTCACGC CAAAAATAGC CGCCGTTTTG GTAGTCAAGG GACTGTTGGA TTTTGTTATT
ACGGACTATC TGTTATTTCG CTCCGTAATT TTGACCAACG CAACGACGGC TTCCGTCGGC
TTGGGATTGA CGATCCCCTT GGCTTTTTTG GTCGACTGGG TCTTGGGCAA GGGCAACGCA
ACGACCATTC AATCCTTGCT TGGACCAGTA GCCATCGCTA TCGCCTTTTT GATAGTGAAC
CTTACTGGCA ACTCGATAGA CGAGCGGGAA CAGAATATTC ACGACACAAA TACACCATCG
ACTGAGAATC CGCAATCGGC AGGAGTTTTT GCATAG
|
|---|
| Protein sequence | MQGPHFEPWF ILASRPSTAT DEQSAGRKAR YALGLTFIMM QCIVWICASV TTQYLYGGQG
FHSPFLMTFA GVGMLAIFLP LRLLAVRIGI APKLLKSTED ADPAVNNGVG NSHDEKLAQA
TSYHQVFDAV ASERRELSHP TTFWNHRKHA LAALHIAPAM FFADWCFNHG LAYTSVASST
VLVSTSCVFV FLFAVLVRVE AFHSVKLAGV LLAVAGTVLT TMGDISVSEE SSGVDAERHV
LTGDLFSLMA AIGYAFYTVQ VRVLCPQNED LYSMQLLLGY VGVVATIPLL PVACYALTQV
TFTPKIAAVL VVKGLLDFVI TDYLLFRSVI LTNATTASVG LGLTIPLAFL VDWVLGKGNA
TTIQSLLGPV AIAIAFLIVN LTGNSIDERE QNIHDTNTPS TENPQSAGVF A
|
|---|
| |