Gene PHATRDRAFT_39708 details

Gene Information

• Locus tag: PHATRDRAFT_39708
• ID: 7195317
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011688
• Strand: +
• Start bp: 512261
• End bp: 518679
• Gene Length: 6419 bp
• Protein Length: 1883 aa
• GC content: 46%
• Product: predicted protein
• Protein accession: XP_002183618
• Protein GI: 219126761

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 0.405185
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATGGATG AGGATACCGA GCAGACCAGC CGTGCCGAGT CGGAAAGAAA TTCCGCGATC 
GAGGAGCTAC ATAGCAACGA TTTTGAAGCT CAGCAAGTCA CACCTGACCC TATGGCCAAT 
TCAACGACGC GACTACTGGC ACCTACGGAC GTTGAATCTC TGGACGAAAG ACTAGAATCG 
AGCACTTCCC CGTCCGGATG GAGTCAAATC ATCGTCCTGC TCCGAAAGAA CCTTTTGATC 
AAGATCCGGA CTCCGCTGCA AACATTTCTG GAGATTTTCA GTCCTGTGCT CATGATGTTG 
GTACTTGTGG CAGCATACCA ATTGTCCAAA GTAACTTATC GCGAAGCCAA AACGTATGAT 
ACAATTGAAA TCGACCTTCC CGGCCCATGG CTCGACATCG TTCGCCAGGC GACGCAGCTA 
TCGAACTTCT CTGAAAACGG CCGTCGGCTA CTACGAAGTG AATGGGATGA ACCCGAATTC 
CCTGGGTCTC TGTTCTTGAT CGAGAAATGG GAGCTGTTTC GGTCGATGTA TCTACGATCG 
ACGACACGTC GTTCTGAGCG GCGTTTGCAA TTTACCGAGA CTACAGATGA TGACATTGAG 
GTTGACGATA ACGAGCGAAA AGACGTCAAC AATATATATG ATGTAGTTGA CGAGGCCTAC 
AGGGAAATCC GTCGCCTTCT GAAAAATCCC ATGTTTATTC CGTCCTTTTC CCAGTATGTC 
AATATTTCTC AGCAGATGTC GAGTCTGATC AATGTAAACG ACTTGCCCCG AGTCTTTTCT 
GAAAGTAGCT TTGGACGGCA GTGGGGAAAT TTGTTAACGT TGGGTACCAT TCATCTTTCT 
CCGCCCTCAG GGGTCGCCCT AGATTTTTGG GCTCATCTGA ACGATACTTA CCCTGACGCC 
ATAGCCTCCT TGAAAATTAG AATGCATCGA AGCGAGAGTG AAGCTATCAA GTTCATAGAT 
GAAAATTTGA ACGAGCGAAC GTGGGCACTA ATCGACTTTT CCGCTTGGTC TACCGATGGC 
TCCATGGATA ACGACGCGAC CTTTAAGATT CGCATGAACT ATACCACGCT ACCAAATACA 
GCTCAAATCA GCGACTTTGT CAGCATTGGT CTCAACACAG CTTACCAGCG CTACTACTTA 
TCAGGATTTT TGACTATACA ACGGACACTG AATGAGTTTG TATTTTCAAG GGCCGGTGGA 
AGCTGTCCAG AGCTGTTCTC GAACTCGAGC GAAATTTGGA GCATGCCCAT GCCGACAGCG 
GCATATTCAC AAAATAGCTT TTTTCTTGCG GTTGGCTTTT TATTAGGGTT GGCCATCGTT 
ATGGCGTATC TTTACCCCAC TTCACGACTG ATCAAGCTCA TGGTAGAAGA AAAGGAGACA 
AAAATGAAAG AGACGCTTTT GATCTTGGGA ACGCTTCCGT GGGCTCATTG GTGGTCTTGG 
CTTTTAACAT CATCGATTGT ATTCTTTGTC ATCGCTTCAT TGGTGACTTG GGTGATAAGT 
GCCAACATTC TCAAGTTTTC AGCACCGATT TATATTTTCG CATGGATCGG ACTATTTTCA 
TCTTCCTCTT TAGGGTTTTG CTTTACGGTC TCAGCTCTAT TTAATAAAGC GAAGCTGGCG 
AGCATTTTAG GCCCGATGAT CTTGTTTGCA ACAATTCTCC CTCGTTTCAT ATTTTTCGGT 
TACAATCGCT ACGAAGCTAC AGCAAAGAAG AAATGGGCGT CTTTGCTGCC GGCATCTGCT 
TTCGCTTTCG GGGCTGATAT CGTCGCTGGT AGGTTTTGAT ATCCCTGGAT TGTCTGAATC 
GGAATGTAAC TGATTGTGGC CCTCTTTCTG ATTCTTGTCA TCTTAGATTA TGAGTATGCT 
GAACAAGGAA TTCAAGCCTG GAATGCTGGC GAAGGCGAAT ATTCTTTCCA CACCTCTTTG 
GCGTTCCTCT TGTTTGATAC GATTCTTTTC TTGCTTTTGG GCTGGTATCT TGAACAGATT 
ATGCCCCGTG ATTTTGGTAC ACGAAGGCCA TTTTGGTTTT TGGTTTCAAC GAAATTCTGG 
TGTAAATGCA AAGATGCATC GGCTCATAGT CTGTCCAATT CGGGGTCTGC AAACAAAGTG 
GAAAGGTAAG TACTGATAAC ACGCAGATTG ATCCTTGACC ACAATTCTAA CGTTCGGTTT 
CCTTTATCGC TCGTAAAAGT GCTTCTGTCG ATGAGTCGTT TCTTGTTCCG TCTGTGCAAG 
CTACCAAGCT CCTGAAACAT TACGGGGCAA AGAAAGGGAC CGGGCTTCAG CCGGCTGTCA 
ATCAGCTAGA TCTAACGCTC TACGAATCAC AGATCACGAC TCTACTAGGT CATAACGGAG 
CGGGCAAGAG CACATGTATT GGTCTTCTCA CTGGTATGTT CCCACCGACG TCTGGTGATT 
GCAAGATATA CGGGGAGTCT ATTGTTCACA ACGTTAACCG GGCCAGAAGA TCAATTGGGA 
TCTGCCCTCA GCAAAACATT CTTTTCGAGC GACTGACTGT CTTCGAACAC ATCGTATTCT 
TCCAACGTCT GAAGGGAGCG AGGCAGAATC GAAGGAAAGC AAAGGCACTG GCGACAGATC 
TAGGCTTGGA ATCTTTTCTT CATACCACCG CTGCTGCTCT AAGTGGTGGC AATAAAAGAA 
AGCTCTGCGT TGCCATTGCG CTATGCGGGA ATCCAAAATT TCTTGTCTTA GACGAGCCGA 
CCTCCGGTAT GGACCCCGAT GCGCGGCGCA AAACGTGGGG CGTGCTGCGT AAACAACGAG 
CAGGGAGAAC TATTCTGTTG ACAACCCATT TCATGGACGA AGCTGAACTT CTTTCAGATA 
GAATTGTTGT TATGCGCGCA GGAGATTTAC AGTGTACGGG ATCACCGGTG GAGTTAAAAG 
TAAGGTTTGG CCTCGGTTAC AATTTTACAG TATGTATCGA AAGGCAAGAA GAACAACATC 
CGACCTCTGT TGATATTGGA GAAATGACCA CAGAGTCCTA TATGGCCTTT AAAAGTGCAA 
ACATCTTATG CTTTATACAG AAATTCATAC CAGATGCGAA GTTGCTGCGT GTTGGAGGCA 
GAGAACTCAC TTTTAACTTA CCACAGAGCT TTGAGGACCA GTTTGGAGAC ATGTTCGATT 
CCTTAGAGGT CAATCAAGGG TCGCTTGAAG TCGGTTCTTT CGGTATCCAA AACGCATCAC 
TGGAAGAAAT CTTTATCAGC CTGGTCGAGC AGGAATCTGG CGATCAAACA GCCAAAGCAC 
ATGATGAGGG ACCTAAAGAG CCTCGATTTG ACACGAGAAC ATCAAAAGTC TCAGAGGGGC 
ATGATATTAC CATGGGCGAT CACTCACAGT GTTTGTCCGG TTTGACCTTC ACCGATGCAG 
CTGGTCAAAC GCTTGAATTA TCCGCCTTAT CTTCCTCACG CCAGATAGTC GTTCTTTACA 
AAAAGAGAGT CACGGTTCAA AAACGAGACT TTCGAGGGCT TTTTTTTACA GTTGGAGCCC 
CGGTTCTTGT TTCCGCTCTC GTTCTACTTA TATTGAAGGT CAACCTTCCG ATAGTTGGGC 
CGGAGATTTC CATGTCCTTA GCGCTCTACA CCCAGTCCAG GACCGGCAGC CGAAGTGGGA 
CAGAAGTTCT TGTTGGGGGT GCTGCAGGTT CAGCGCTGCC TACTAGCCGT CCTCTTATGG 
CAGACATTAC TATTTTCGAG AAAACCTACC CCTCCGTCCA TTTTGAAGTA ATCGAAGAAC 
TAGCTTCATC AAGCGATATT TCAAGATATC TACTCGACAC GATCAATTCA CAGAATCACT 
CTGTTCAGTA CGGTTCCTTC TCGATAAACG ATTCGATCGC TTCTGTTTCA ATCGTGGACT 
GGAGCGCTCT TAAGAATGAA AATGGAACGG ATAGCGTTCT TCTGGATCTA AGCGGTCCAA 
TGGGGATCGG TGACCTAGTC GACCTTGTCC CTTTCATGAC GGGCGACCAA GAATATCGTG 
AAACCGTTGA AACTGACATG AGTATTCTTC ACAACTCTTC CTCACCCCAT GCTGTGTAAG 
TCGGCGTCAT TTCAGTAGGG ATGGTGCCCT GCTTGATGGC CGCTTTATCT CATTTTCTTT 
TTTCTTAGTG CCGTGTTTAA TCAAGCTTAC GCTGATCACA TCCTGAAGGT ATGTTCGGGG 
GAACCAAAGA GGATACTTCA ATCACTTAAC GCCCCTTTGC CATTGACAAC GGCACAAACA 
GTGGAAATAA AGGCGATTCT TAGCATTCGT AAGTAACAGA TTTGAAGGGA TCAAATTTGC 
GTCCCTAAAT GAATCTAATC AAAATTTCTT CCTTTCCAGT GGCTTCATTG TTCCTCCTGA 
TCCCATACTG CTACATCCCT GGTGCCTTCA TTGTTTTCAT GGTTAAGGAG AAATCTTGCA 
AATCAAAACA TCTACAGCTT GTAAGCGGTG TGGATGTGAG ATCATATTGG ATATCAAATT 
ATGCCTTTGA TGCAAGTGTT TTTTTATTGT TGACCCTGCT GGTGATGGCT GTTTTCATGT 
TTTACGGAAG CGATTCAGCG GAAGTTTTTG TGGGAGACTT GGAGTCTTTC TTCTGTACGA 
TGGCGCTAAC GTTCGGCTAC GGTTTGAGTA TTCTTCCTTT TGCTTACCTG TGCTCCCGCC 
GTTTTCACAA TCATAGCTCC GCTCAAATTG CAGTCATAGT AAGTTTGGAA GTCGCGGAAG 
TCGGTCCATT CGTACACGGG ATATTCAATT CTCAATTTTG CTTCGCTTCG TTTAGGGAAT 
TGGATTCGTC ACGGGCTTTG TTTTCGTCAT GGCATATTTC ATTATGATCT CGATTGAGTC 
GACCGAGCAA CTTGCAAAAA CCCTTCGCCC AATTTTCAGA ATATTCCCGG GGTACAATGT 
TGGAGATGGA TTCATTCAAA TGGCCAACGC CTTCTGGGAG AGGCGCATAC AAGGGACTGA 
TTCTGGGAGG CCGTTCAGCT GGGAGGTCGC TGGTAAACCC GTATTACTTT TGTATGGACT 
AGCGCCAATC TATTTTTTGA TATTGCTGAT CCTTGAATAC TCAGGGGACG GAAGCGCTGG 
AGGGAAGATA GGCTGGGTAA TTCGGTCAGC CAAATCTTCA TGGGAACGGC TGATTCTTCG 
CTGTAACGGT GTCCATGCTG ACTGCTCGCT TGACGATGGA TTGAAAGAGG GCACGCGAGA 
CGAAGACGTT GAGGGAGAGC GCATATTTGT CTATGAAAAT ATCGACCAAT TAAAGCATTC 
CGCTCCTATT GTCTACCAGG ATCTGTGGAA AATCTACCCT CCCTCTGTTG GTTTGTTTGG 
GACGATGGCG GCATTTGTAC GTGGCCACAT ATATATGATA TGCTGCTTGC TCAGAAAAAG 
CTCGGCAGAG AGAAGGACAG TGATATTGAA GGAGAGGAGA CGCGTATTGC TTCCTAAACG 
GGCCGTTCGT GGTGTAACAA CGTGTATACA GGAAGGCGAG ACGTTCGCAC TTTTAGGTGC 
AAACGGGGCT GGAAAGAGTA CAAGTCTGAA TGCCATTACT GGAGACATAT CCGCAACGAA 
AGGCAAGGTA TTTGTCGCCG GATACTGTGT TACTGGAAGC AACGATGACT ATGACGTCAC 
CAATGCACGG AAGCACCTTG GCTATTGTCC ACAAATTGAC CCTCTACTGG AGCTAATGAC 
ACCGAGAGAG ACCTTGGCTA TGTTCGGTCA AATTCGGGGC ATTCCGCTTG AGATACTGAA 
CGGGCATGTA GAGAAGCTAC TCGAATTTCT GTTACTTAGC ACACATGCAG AGAAGACATG 
CGAAAACTTG TCGGGAGGAA ACAAGCGCAA ATTAAGTCTT GGAATTGCGC TAATTGGTGA 
CCCGACAGTG TTGCTGATAG ATGAAAGCTC GTCAGGTCTG GACCCAGTTG CTAAACGCCG 
GATGTGGAGC CTCATATCCC GAGCGGCAAA GAATCGGTCT ATTATTCTGA CTACTCACCA 
GATGGAGGAA GCGGAGGCGT TATGCACGCG TGCAGGCATC ATGGGTAACG GGGAACTGCT 
TTGTCTTGGC TCGGTTCAAC ATTTGAAGGT AAGATTCAAC AGTAGATTTG CACACAAGAT 
TGTAACTTCG TCCTTTCGCT GACGTGTTGT ATCCTCATGT TGCTGCGTAG TCCAAGTACC 
TCGACGGGTA CACAATCGAC ATATTTTGCA GTTCAACGAG CTCGGAAACG GATAGAGATG 
CTTTGGTGTC GGAGCTACTG GATAACTCTC TTCCTGGGTC TCTGCTAGCA GAACGTCATG 
GTCGTTTTCT CCGTTTCGAT GTACCAAAAT TGCCGTCTCT TGGCCTTGGC CATACTTTCC 
GCCGGTTGCA AGCGTTGAAA GGATCTTGCA GCTTTCCTTT GGAGAACTAC AGTATTTCTC 
AGTGCTCCCT TGAGCAAGTT TTCATCAAAC TTACTAAGCA AAATAACTTT GTTGATTAG 

 

Protein sequence

MMDEDTEQTS RAESERNSAI EELHSNDFEA QQVTPDPMAN STTRLLAPTD VESLDERLES 
STSPSGWSQI IVLLRKNLLI KIRTPLQTFL EIFSPVLMML VLVAAYQLSK VTYREAKTYD 
TIEIDLPGPW LDIVRQATQL SNFSENGRRL LRSEWDEPEF PGSLFLIEKW ELFRSMYLRS 
TTRRSERRLQ FTETTDDDIE VDDNERKDVN NIYDVVDEAY REIRRLLKNP MFIPSFSQYV 
NISQQMSSLI NVNDLPRVFS ESSFGRQWGN LLTLGTIHLS PPSGVALDFW AHLNDTYPDA 
IASLKIRMHR SESEAIKFID ENLNERTWAL IDFSAWSTDG SMDNDATFKI RMNYTTLPNT 
AQISDFVSIG LNTAYQRYYL SGFLTIQRTL NEFVFSRAGG SCPELFSNSS EIWSMPMPTA 
AYSQNSFFLA VGFLLGLAIV MAYLYPTSRL IKLMVEEKET KMKETLLILG TLPWAHWWSW 
LLTSSIVFFV IASLVTWVIS ANILKFSAPI YIFAWIGLFS SSSLGFCFTV SALFNKAKLA 
SILGPMILFA TILPRFIFFG YNRYEATAKK KWASLLPASA FAFGADIVAD YEYAEQGIQA 
WNAGEGEYSF HTSLAFLLFD TILFLLLGWY LEQIMPRDFG TRRPFWFLVS TKFWCKCKDA 
SAHSLSNSGS ANKVESASVD ESFLVPSVQA TKLLKHYGAK KGTGLQPAVN QLDLTLYESQ 
ITTLLGHNGA GKSTCIGLLT GMFPPTSGDC KIYGESIVHN VNRARRSIGI CPQQNILFER 
LTVFEHIVFF QRLKGARQNR RKAKALATDL GLESFLHTTA AALSGGNKRK LCVAIALCGN 
PKFLVLDEPT SGMDPDARRK TWGVLRKQRA GRTILLTTHF MDEAELLSDR IVVMRAGDLQ 
CTGSPVELKV RFGLGYNFTS FEDQFGDMFD SLEVNQGSLE VGSFGIQNAS LEEIFISLVE 
QESGDQTAKA HDEGPKEPRF DTRTSKVSEG HDITMGDHSQ CLSGLTFTDA AGQTLELSAL 
SSSRQIVVLY KKRVTVQKRD FRGLFFTVGA PVLVSALVLL ILKVNLPIVG PEISMSLALY 
TQSRTGSRSG TEVLVGGAAG SALPTSRPLM ADITIFEKTY PSVHFEVIEE LASSSDISRY 
LLDTINSQNH SVQYGSFSIN DSIASVSIVD WSALKNENGT DSVLLDLSGP MGIGDLVDLV 
PFMTGDQEYR ETVETDMSIL HNSSSPHAVA VFNQAYADHI LKVCSGEPKR ILQSLNAPLP 
LTTAQTVEIK AILSILASLF LLIPYCYIPG AFIVFMVKEK SCKSKHLQLV SGVDVRSYWI 
SNYAFDASVF LLLTLLVMAV FMFYGSDSAE VFVGDLESFF CTMALTFGYG LSILPFAYLC 
SRRFHNHSSA QIAVIGIGFV TGFVFVMAYF IMISIESTEQ LAKTLRPIFR IFPGYNVGDG 
FIQMANAFWE RRIQGTDSGR PFSWEVAGKP VLLLYGLAPI YFLILLILEY SGDGSAGGKI 
GWVIRSAKSS WERLILRCNG VHADCSLDDG LKEGTRDEDV EGERIFVYEN IDQLKHSAPI 
VYQDLWKIYP PSVGLFGTMA AFEGETFALL GANGAGKSTS LNAITGDISA TKGKVFVAGY 
CVTGSNDDYD VTNARKHLGY CPQIDPLLEL MTPRETLAMF GQIRGIPLEI LNGHVEKLLE 
FLLLSTHAEK TCENLSGGNK RKLSLGIALI GDPTVLLIDE SSSGLDPVAK RRMWSLISRA 
AKNRSIILTT HQMEEAEALC TRAGIMGNGE LLCLGSVQHL KSKYLDGYTI DIFCSSTSSE 
TDRDALVSEL LDNSLPGSLL AERHGRFLRF DVPKLPSLGL GHTFRRLQAL KGSCSFPLEN 
YSISQCSLEQ VFIKLTKQNN FVD