Gene PHATRDRAFT_39534 details

Gene Information

• Locus tag: PHATRDRAFT_39534
• ID: 7195355
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011688
• Strand: -
• Start bp: 72802
• End bp: 74858
• Gene Length: 2057 bp
• Protein Length: 572 aa
• GC content: 48%
• Product: predicted protein
• Protein accession: XP_002183668
• Protein GI: 219126864

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTCTTGA CTTCCTTGGG TAAGTCACAG AATGCCACAC CTCTAGCGAA GTCGGACCGA 
ACCAGCCCTA CGAGCGACCG TATCAAATCC ATCGCGAACA AATTTTCATC TCTCTAGGGA 
AGGTGTAAGG TCAGTCGACC GAAAACCATC GACGCTAATA CCAACGAAAC CTCTTCTGCA 
GTGCAGTTTA CTGTGAGCTC CTGAATTTTC TCGTTAGAGT ATTTCCATAG CTTTCGCTCT 
GTTCTATCCC TTGCGGCGAA CGAACGACAT CCAGACATAA AAATTGGGAT GCCTCCTACC 
GAACGAACCA GCTTGATGGA TCCATTGATG GGTGAGGAGG CGAATACAAT CAGAAACAAC 
AACAAAGGCA ACTACCAGGC AACCACGAGG ACGTCAATGT CTTCTGCTTC GGCTTCTCCT 
CCTACACACG CTCGTCATCA GTCGATCCAA CTGTCTCTGG ACGAGCTTGC ACAACCGTCT 
CCGCCCGCTT CGCCCTCCGC TTCTCAAAAC GTTAGAAACG CTGCCAAAAC CACGGCATAC 
AAACGAGATG TGACGTACAA TGGAGATAAT CACCTCGAAG TGCTCTTTCA AATGCACGGA 
TCCGTCTGGC CTCACGTTTT TCCCTGGTGC ATTGCGACGA TCGTATTCAC CTACGCAATC 
ATTCTGCTGC GGAACCACAA AATTGTCGAC CTCACCATTG ACAACAACAA TGGCCATTCT 
TTCATGAGCA TTCTCGTATC CTTTTTGGTT GTCACTCGGG CAACCATTAC CTATAATCGC 
TTTTACGAAG CACGACAATT CCTGGCGGAT TTGTTTCGTT CCAGTCGGGA AACCATACAG 
TACGCTTGTT TGCTCACCAC GCTGGACCGG GGGACCAAGG CACAACAATG GCGCCAAGAC 
GTCGCCTACC GGACTATTGT GAGCTTGCGT GTAGCTATTG CAGCCGTCGA GTTTCGGTCG 
CACGGAGTGA GCGCATGGGA GACCTTGCCG GATGAAGACC ACGAGTACAC ACCACTCCTT 
TTGCCACGAC AAGTACGTCA GCAACCCACT AGTATCTCGA CGACTGCTTT GCAAACTTTA 
CCAGCCAACA CTCCAACTGC ACGTGACAAG GACGGTGTGG ATGATTCGCT ACAACCGATT 
GGACAAAGTG CCTGCGCTAC AAAAGATCAG GAATACATTC AACAGTACAA GCCCGTCACG 
GACCATTCCC AATTTCTGGA AGCCATGCGG CACGGATCCC GTACAGTGAT GGACGAAAAT 
TTGCGAGCAC CTATCGTTTG GTGCTACAAT TTGCGGGAAA AGATTCTCGA ACCTCGCAAG 
GGTGGTATAC TGGTAACTCA CCCACCACAT ATCAACGAGG AGCTCCGATT ACTGGCCATT 
ACAAGTGATT GGCTGACCGC TTTTCACGGT TTGAAGATGC TGCTGACTAC GCCGTTTCCC 
TTTCCCTTCG TGCAAATGAC AAGAACTTTT CTGTTTGTGT GGGTCTTTAC TTTGCCAATG 
GTGCTGATTG CTGACAATGA TCAAACTTTA GAAGTGTTGG TACTTATGTT CTTCATCACA 
TATGGTTTTT TGGGTTTGGA GTATGTCAAT ATGGAATTGG ATGATCCGTA TGGCACTGAC 
CCCAACGATT TTCCGGGAAA GTAAGTACTC GCGTACTGTT AGTGACCCCG ACGTCATGAG 
TAGCAAATTG TGTTCTCCAC AAAATCCTGT TTATCAGTGC TTTTTTGTGG TTGTCGCTAA 
CTGCTTCTCC TGCCTGCTTG AATTCCTCTT TTTGTTTCAG ACGATGGGCA GAGCTTGTTT 
ACGAGGACAT TTACATTACC CTTTACAAAA CGGACGGATT CGATTCGGCC ATGGCCTTGC 
GGAATCGCAT AACGGAAAGA ATTGCGAGGG GGACGGCACT CGACAACTTT AACGAAGACA 
TGCACAATTC CAAGGCAAAT TTTTTTGGAA CCCATTCCTT TAAACACAGC TCACAGAAGA 
CACAGGCTAG TAGTGACTTG AGTTCTTTAC CCCCAAATCA AGACAACTCG AACAGGAATT 
TTGGAAACGT CGTTTAA 

 

Protein sequence

MFLTSLEYFH SFRSVLSLAA NERHPDIKIG MPPTERTSLM DPLMGEEANT IRNNNKGNYQ 
ATTRTSMSSA SASPPTHARH QSIQLSLDEL AQPSPPASPS ASQNVRNAAK TTAYKRDVTY 
NGDNHLEVLF QMHGSVWPHV FPWCIATIVF TYAIILLRNH KIVDLTIDNN NGHSFMSILV 
SFLVVTRATI TYNRFYEARQ FLADLFRSSR ETIQYACLLT TLDRGTKAQQ WRQDVAYRTI 
VSLRVAIAAV EFRSHGVSAW ETLPDEDHEY TPLLLPRQVR QQPTSISTTA LQTLPANTPT 
ARDKDGVDDS LQPIGQSACA TKDQEYIQQY KPVTDHSQFL EAMRHGSRTV MDENLRAPIV 
WCYNLREKIL EPRKGGILVT HPPHINEELR LLAITSDWLT AFHGLKMLLT TPFPFPFVQM 
TRTFLFVWVF TLPMVLIADN DQTLEVLVLM FFITYGFLGL EYVNMELDDP YGTDPNDFPG 
KRWAELVYED IYITLYKTDG FDSAMALRNR ITERIARGTA LDNFNEDMHN SKANFFGTHS 
FKHSSQKTQA SSDLSSLPPN QDNSNRNFGN VV