Gene PHATRDRAFT_30003 details

Gene Information

• Locus tag: PHATRDRAFT_30003
• ID: 7195231
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011688
• Strand: -
• Start bp: 111193
• End bp: 111983
• Gene Length: 791 bp
• Protein Length: 204 aa
• GC content: 50%
• Product: predicted protein
• Protein accession: XP_002183677
• Protein GI: 219126883

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 0.537126
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GCCGCTGTGA CTGGTTCAGA ACAAACACAT AGCTAGCGTC CAACGACGAT CGTCTCCACT 
CGTCTCTTCT GTTTATCAAC ATTTGAGCCT TCCTCATCCC CAGCACTAGA CAATATATTT 
CTAGTCCCTC GCCATGTCCA TATTGGAGTA CAACGGCGCC GCCATGATTG CCATGGCGGG 
CAAGGATTGT GTCGGCATCG CGGCGGATCG TCGTTTGGGT GTACAGCTGC AGACAGTCGC 
GACCGACTTC AACAAAGTCT TTGCCATGGG ACCTAAATCG TACGTGGGTC TCGCTGGACT 
CGCGACGGAC GTACAAACGC TCAAGAATAT CCTCGAATTT CGTAAAAATC TGTACGAGCT 
CAAGGAAGAA CGAGAGATGA GTCCGGCGAC GCTTTCGCAC TTGCTTTCGA CATTACTGTA 
CGAAAAACGC TTTGGTCCTT ATTTTGTGGA GCCGATTGTG GCCGGTTTGA ATGAAAAGAA 
CAAGCCGTTT CTTTCCGCTA TGGATTTGAT CGGCGCGCCG GTGCAAGCGG ACGACTTTGT 
TGTTTCGGGA ACATGCACCG GGAATCTGTA CGGAATGTGC GAAAGTCTGT ACCGACCGGA 
TTTGGAACCG GAAGAGTTGT TCGAGACAAT TGCCCAGGCT CTGCTGAGCT CGGTGGACCG 
AGACGCCATT TCGGGATGGG GCGGTGTCGT TCATATCATT ACTAAAGATG GCGTAACAAC 
GAAGGAGCTG AAGGGACGTC AAGATTAGTG TAGCACGGAG ATATACTTAT GAAACAAAAT 
ATTACTCCTT C 

 

Protein sequence

MSILEYNGAA MIAMAGKDCV GIAADRRLGV QLQTVATDFN KVFAMGPKSY VGLAGLATDV 
QTLKNILEFR KNLYELKEER EMSPATLSHL LSTLLYEKRF GPYFVEPIVA GLNEKNKPFL 
SAMDLIGAPV QADDFVVSGT CTGNLYGMCE SLYRPDLEPE ELFETIAQAL LSSVDRDAIS 
GWGGVVHIIT KDGVTTKELK GRQD