Gene PHATRDRAFT_22955 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_22955 
Symbol 
ID7195299 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011688 
Strand
Start bp431062 
End bp432660 
Gene Length1599 bp 
Protein Length311 aa 
Translation table 
GC content54% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002183607 
Protein GI219126738 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.271201 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CCTATTTGCG TGTTACACGT GAGTAGTACC CACGACAACG TGATTGAAGT TTGGTGTACC 
AGAGAGAGAG AGAGAGACCC TCATTGTACC AAAGTTCTCT CGGGAATCTT CCGAAACAAC
GTTGGACGCC CCTCGGATCG CACGGTGATC GTTGGAAGAG GAGGGGGTTG TCGGGAGCGA
GCGAGACAGA GAGCCAGCCA TCGACCGAGA CACAACATAT CACACACACA CACACATATA
TATATATATA AACTCGCACA CGGCAATGGC GACGGCAATA ACGAGTCGTT CGGGACACGT
CGGCAAGCTG GCCTTGCACC GAACGATTGC CAGTTTCCGC GACTGGCGAC GAGCCGTGGG
CTTGTCGCGG CCCGATACCA CCATTGGCTT GGTACCCACC ATGGGAGCCC TACACGAAGG
TGCGCAGCAG CAGACAATGG CGATTGCGAC CAATGCTACC AGTCATGCAT ATATATGCAT
TGCTGACGGG TTGTTGGAAG TGGCAATTTT GCTGTCACAC ACTGACTTAC TCACACTTTC
GTTGATCGAG ATAGGTCATT TGGCGTTGGT CCGTCAAGCA CGACGCGACA ATGACGTGGT
GGTTGCGTCT ATCTTTGTCA ATCCCGCTCA GTTTGGACCG CACGAAGATC TCGAACGCTA
TCCTCGACAA CTCGCACAAG ATTCCCGCGT ACTGGCGGAC TTGGGAGTGG TACGTGCCGG
TGTGCGTAAT GTATGTATGT ATGTGTATTG GTTTGGTCCA GCGTCCCGAA CCCTTTGCCA
GAGACAACAA CAACTACTGT ACCCGTGCCA CATGCGATAT AGTACGATAT ACTGACCCCT
TGTCGCAATC TTGGTGACAG GATCACGTCT TGGCCCCCGA TGCCGACATG GTGTACGGTC
AACATCACAC TACCTACATT GACCCACAGG CAAGTTTGCG GAAAGTGTTT TGGTCGTCAC
TCCTCACAAT TCACACTCTC GTATACGCTC ACAAACACAC TCACTCACAC ATACCATAAC
AATCACGCGT TATACAATCC GTAGGGCTTT GACCAGACGG CCGAAGGTCA ATCCCGCCCG
GGCCATTTCC GGGGCGTGGC CACCATTGTC ACGAAACTCT TCAACATTGT CCAACCCACC
AACGCCTACT TTGGTCAGAA GGACGCCGCT CAGTGTGTAC TGATACGCCG CGTCACGGAG
GACCTCAATT TGGACGTGAC CGTGCACGTC CTCGATACGG TCCGCGACGC GGACGGTCTC
GCCCTTTCCT CCCGCAACGC CTACCTGACG GAATCCGAAC GTCGGGCCGC GCCGGTCGTC
TACCAAGCCC TGACCAACGC ACGCAGTCTC TTTCAGCAAC TCGAAAACGA TGACGACGAC
GGTGGTCGAG AGAACCCGTG TATCGACCGG GACGCCCTCG TACACGTCGT ACGAGCCACG
TTGGCGGCTG AACCGTTGGT ATCCGAAATA CAGTACGTGG CAGTGGACTG TAAGGCGACG
CTACAACCAC TCGAACACGT ACATCTAAAA CAAGGAGCCG TTCTATCCCT GGCGTGCAAA
ATCGGCAACG TACGCCTCAT TGACAACATT ATCTTATAA
 
Protein sequence
MATAITSRSG HVGKLALHRT IASFRDWRRA VGLSRPDTTI GLVPTMGALH EGHLALVRQA 
RRDNDVVVAS IFVNPAQFGP HEDLERYPRQ LAQDSRVLAD LGVDHVLAPD ADMVYGQHHT
TYIDPQASLR KTAEGQSRPG HFRGVATIVT KLFNIVQPTN AYFGQKDAAQ CVLIRRVTED
LNLDVTVHVL DTVRDADGLA LSSRNAYLTE SERRAAPVVY QALTNARSLF QQLENDDDDG
GRENPCIDRD ALVHVVRATL AAEPLVSEIQ YVAVDCKATL QPLEHVHLKQ GAVLSLACKI
GNVRLIDNII L